Canis lupus familiaris (dog): 100855907
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Entry
100855907 CDS
T01007
Symbol
FXR1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X4
KO
K15516
fragile X mental retardation protein
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
100855907 (FXR1)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100855907 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
100855907 (FXR1)
mRNA cycle factors
Stress granule specific factors
100855907 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXR_C1
KH_9
FXMRP1_C_core
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
DUF150_C
Tudor_2
Motif
Other DBs
NCBI-GeneID:
100855907
NCBI-ProteinID:
XP_003640183
Ensembl:
ENSCAFG00000011582
VGNC:
53461
UniProt:
A0A8C0TBY4
A0A8I3PAF1
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All DBs
Position
34:18212277..18274019
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AA seq
621 aa
AA seq
DB search
MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELS
DWSLAGEDDRESRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLL
DNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLVTVADY
ISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDEISKLQRTPGE
EKINTLKEENTQEAAVLNGVS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgacggtggaggttcgcggctccaacggggctttctacaagggatttatc
aaagatgttcatgaagactccctcacagttgtttttgagaacaactggcagccagaacgc
caggttccatttaatgaagttagattaccaccaccacctgacataaaaaaagaaattagt
gaaggagatgaagtagaggtatattcaagagcaaatgaccaagaaccatgtggatggtgg
ttggctaaagttcgaatgatgaaaggagaattttatgtcattgaatatgctgcttgtgat
gccacttacaatgaaatagtcacatttgaacgacttcggcctgtcaatcaaaataaaact
gtcaaaaaaaataccttctttaaatgcacagtggatgttcctgaggatttgagagaggcg
tgtgctaatgagaatgcacataaagattttaagaaagcagtaggagcatgcagaattttt
taccatccagaaaccacacagctaatgatactgtctgccagcgaagcaactgtgaagaga
gtaaatattttaagtgacatgcatttgcgaagtattcgtacgaagttgatgcttatgtcc
agaaatgaagaggccactaagcatttagaatgcacgaagcaacttgcagcagcttttcat
gaggaatttgttgtgagagaagatttaatgggcctggcaattggaacacatggtagtaac
atacagcaagctaggaaggttcctggagttacagctattgagctagatgaagatactgga
acatttagaatctatggagagagtgctgatgctgtaaaaaaggctagaggtttcttggaa
ttcgtggaggattttattcaggttcctaggaatcttgttggaaaagtaattggaaaaaat
ggcaaagttattcaggaaatagtggacaaatctggtgtggttcgggtgaggattgaagga
gacaatgaaaataaactacctagagaagatggtatggttccatttgtattcgttggcact
aaagaaagcattggaaatgtgcaagttcttttagaatatcatattgcttacctaaaggaa
gtagaacagctaagaatggaacgcctacagattgatgaacagctacgacagattggttct
aggtcttatagtggaagaggcagaggtcgtcggggccctaattacacctccggttatggt
acaaactctgagctgtctaacccctctgaaacagaatctgagcgtaaagatgagctgagt
gattggtcattggcaggagaagatgatcgagagagccgacatcagcgtgacagcaggaga
cgcccaggaggaagagggagaagtgtttcagggggtcgcggtcgtggtggaccacgtggt
ggcaaatcctccatcagttctgtgctcaaagatccagacagcaatccatacagcttactt
gataatacagaatctgatcagactgcagacactgatgccagcgaatctcatcacagtact
aaccgtcgtaggcggtctcgtagacgaaggactgatgaagatgctgttctgatggatggg
atgactgaatctgatacagcttcagttaatgaaaatgggctagtcacagttgcagattat
atttctagagctgagtctcagagcagacaaagaaacctcccaagggaaactttggctaaa
aacaagaaagaaatggcaaaagatgtgattgaagagcatggtccttcagaaaaggcaata
aatggcccaactagtgcttctggcgatgaaatttctaagctacagcgtactccaggagaa
gaaaagattaataccttaaaagaagaaaacactcaagaagcagcagtcctgaatggtgtt
tcataa
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