Canis lupus familiaris (dog): 100855927
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Entry
100855927 CDS
T01007
Symbol
PRPF3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X8
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100855927 (PRPF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
100855927 (PRPF3)
Spliceosome [BR:
cfa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100855927 (PRPF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
100855927
NCBI-ProteinID:
XP_003639679
Ensembl:
ENSCAFG00000011820
VGNC:
45020
UniProt:
A0A8C0MGA6
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Position
17:58998383..59023189
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AA seq
683 aa
AA seq
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MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH
PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN
LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG
VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH
RIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREH
FKKHGAEHYWDLALSESVLESTD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtctaagagggagctggatgagctgaaaccatggatagagaagaccgtgaag
agggtgctgggtttctcagagcccacagtggtcacagcagcactgaactgtgtggggaag
ggcatggacaagaagaaggcagctgaccatctgaaaccttttcttgatgattctactctc
cgatttgtggacaaactgtttgaggctgtggaggaaggccgaagctctagacattccaag
tctagcagtgacaggagcagaaaacgagagctaaaggaagtgtttggtgatgactctgag
atctccaaggaatcatcaggagtaaagaagcgacggataccccgttttgaggaggtggaa
gaggaacctgaagtgatccctgggcctccctcagagagtcctggcatgctgactaagctc
cagatcaaacagatgatggaggcagctacacggcaaattgaggagaggaaaaaacagctg
agcttcattagcccccctacacctcagccaaagactccttcttcctctcaaccagagcga
cttccaattggcaacactattcagccttcccaggctgccactttcatgaatgatgccatt
gagaaggcaaggaaagcagctgaactacaagcccgcatccaagcccagctggcactgaag
ccagggctcattggtaatgccaatatggtgggcctggctaatctccatgccatgggcatt
gctcccccgaaggtggagttaaaagatcaaactaaacctacaccactgattcttgacgag
caaggtcgcactgtagatgcaacaggaaaggagattgagctgacacaccgcatgcctact
ctgaaggccaacattcgtgctgtgaaaagggagcagttcaaacaacagctgaaagaaaag
ccttcagaagacatggagtctaacacctttttcgacccccgagtttcaattgccccttct
cagcgccaaagacgcacttttaaattccatgacaagggcaaatttgagaagattgcccaa
cgattacggacaaaggctcaactggagaagctgcaggcagagatctcacaggcagctcga
aaaacaggcatccatacttcaactaggctggccctcattgctcctaaaaaagagctaaag
gaaggagatatccctgaaattgagtggtgggactcttatatcatccccaatggctttgac
cttacagaggaaaatcccaagagagaagattattttggaatcacaaatcttgttgaacat
ccagcccaactcaaccctccagttgacaatgacacaccagttactctgggggtgtatctt
accaagaaggaacagaagaaacttcgaaggcaaacaaggagggaagcacagaaggaacta
caagagaaagtcaggctgggcctgatgcctcctccagaacccaaagtgagaatttcaaat
ttaatgcgagtattaggaacagaagctgttcaagaccccacgaaggtagaagcccatgtc
agagctcagatggcaaaaagacagaaagcgcatgaagaggccaacgctgcccgaaaactt
acagcagaacagagaaaggtcaagaaaattaaaaagcttaaagaagacatttcacagggg
gtacacatatctgtatatagagttcgaaatttgagcaatccagccaagaagttcaagatt
gaggccaatgctgggcaactgtacctgacaggggtggttgtactgcacaaggatgtcaac
gtggtagtagtggaagggggccccaaggcccagaagaaatttaagcgtcttatgctgcat
cggataaagtgggatgaacagacatctaacacaaagggagatgatgatgaggaatctgat
gaggaagctgtgaagaaaaccaacaaatgtgtactagtctgggagggtacagccaaagac
cggagctttggggaaatgaagttcaaacagtgccctacagagaacatggctcgagaacac
ttcaaaaagcatggggctgaacactactgggaccttgcgctgagtgaatctgtgttggag
tctaccgactga
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