Canis lupus familiaris (dog): 100856065
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Entry
100856065 CDS
T01007
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20 isoform X4
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
100856065 (DDX20)
Enzymes [BR:
cfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100856065 (DDX20)
Spliceosome [BR:
cfa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100856065 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
MTR4_beta-barrel
AAA_30
Motif
Other DBs
NCBI-GeneID:
100856065
NCBI-ProteinID:
XP_038309416
Ensembl:
ENSCAFG00000013674
VGNC:
39848
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All DBs
Position
17:complement(63190608..63209513)
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AA seq
788 aa
AA seq
DB search
MLMNTWLACARGGNGGIMAEAALCAQGHCAAIDECEAWAPREGAEQRPPGRGSCGPSVAP
GEGARDLIVQAKSGTGKTCVFSTIALDSLVLENQSTQILILAPTREIAVQIHSVITAIGI
KMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADK
LLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIG
LKQYYKIVNSYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHLADILSAKGFP
AECISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMH
RIGRAGRFGTLGLTVTYCCRGEEENVMMKIAQKCNINLLPLPDPILPGLMEECLDWDVEV
KAAMHTYGLASVPTQPLKKQIQKMERNFQTQKAHGNHVASSRNTSVSALLVKSKNNTKQK
LPAKSHSECGIIEKAASPREWGCDIQLEEQVKNSVQIPAESSASEHQVKEVLPVSLPKIP
CLSSFKIHLPYSLTFIELVEDYEHYINEGLERPVEIIRHYTGPGDHTVNPQNGLVSSKVP
EEKVLMLASSSQSGDSESDSDSYSSRTSSQSKGNKSYFEGSSDTQLKDSESTPMDGHTSL
EQPLNGNDTPNPAECQESPETQTKARHKEGANQRAKQSRRNPPPWSSYRAQAEPQEDGWY
DCCGETHPGFSDAYQDYEEYWRAYYRAWQEYYTAASQSYYWNAQRHPGWMAAYHMNTIYL
QEMMRGNH
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgaacacgtggttggcatgtgcccgaggtggaaatgggggcatcatggccgag
gccgctctctgtgcacaagggcactgtgcagccatagatgagtgtgaggcgtgggctcct
cgggaaggcgctgagcagagacctccgggaaggggaagctgcggaccgtcggtggccccc
ggggagggcgcgcgggatttaattgttcaagccaagtctggcactgggaaaacctgtgtg
ttctctaccattgctttggactctctcgtcctcgaaaaccaaagtacccagattttgatc
ttggctcctacaagagaaattgctgtacagatacattctgttattactgctattggaata
aaaatggaaggcttagagtgtcatgtctttattggagggactccattatcacaagacaaa
accaggcttaaaaagtgtcatattgccgttggctctcctggcagaattaaacaactgata
gaacttgactacttgaacccaggcagtatacgtctctttattcttgatgaagcagataag
cttttagaagaaggcagcttccaggagcaaataaactggatttattcttccttgcctgct
agtaaacagatgttggcagtatcagctacctaccctgaatttttggctaatgctttgaca
aagtacatgagagatcccacttttgtaagactaaattccagtgatccgagtctcataggt
ttgaagcagtattacaaaattgtcaattcataccctttggcccataagatttttgaggag
aaggctcagcatttacaggaactattcagcagaattccatttaatcaagccttagtcttt
tctaatttgcacagcagagcacaacacttggcagatatcctttctgctaaaggctttcct
gctgagtgcatttcaggcaacatgaatcagaatcagcgtcttgatgctatggccaaactg
aaacattttcattgcagagtcctcatttccaccgatttgacttcccgtggaattgatgct
gagaaggtgaacctggtagtaaatctggatgtaccattggattgggagacatacatgcat
cggattggcagagctggtcgttttggtactttggggttgacagtgacctactgttgtcgg
ggagaagaagaaaacgtgatgatgaaaattgcccagaaatgtaacatcaatcttctgcct
ttaccagatcccattcttcctggtctaatggaggaatgtttggattgggacgtggaggtt
aaagctgctatgcatacatatggcttagcaagtgtacctacccagcccttaaaaaagcag
attcaaaaaatggagagaaactttcaaactcagaaagctcatggtaaccacgtggcttca
tctagaaatacttctgtgtctgcattattagtcaaatcaaaaaataataccaaacaaaag
cttcctgcaaaaagccactcagagtgtggaatcatagaaaaagcagcgtctccaagagag
tggggctgtgacatacagttggaagagcaagtgaagaattctgttcagatccctgctgag
agctctgccagtgagcaccaggtcaaagaagtgttacctgtgtcactccccaaaattcct
tgtctgtcttcctttaaaatccatctgccatactctttgacttttatagaattggtagag
gattatgaacattatattaatgaggggttagagagacctgtggaaatcatcaggcattac
acaggtcctggggatcacactgtgaatcctcagaatggtttggtaagcagtaaagttcct
gaggagaaagtgctgatgctggcaagcagtagccagtctggagactctgagagtgacagt
gattcttacagctcgaggacttcctcccagagcaaaggaaataagtcgtactttgaaggc
tcttcagatactcagctgaaagactcagagtccacgcctatggatggccatacatctttg
gaacaacctctgaatggaaacgacacccctaatcctgcagagtgtcaagaatcacctgaa
acccaaacgaaggcaaggcataaagagggggctaaccagagagctaagcagagccggaga
aaccctcccccgtggtcttcctatcgagcgcaggctgagccccaggaagatggttggtat
gactgctgtggggagacgcatccaggtttttctgacgcctatcaggattatgaggaatac
tggagggcttactacagggcgtggcaggagtattacactgctgcctctcagtcgtattac
tggaatgctcagaggcatccaggctggatggcggcttatcacatgaatacaatttatcta
caagaaatgatgcgcggcaaccattga
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