Canis lupus familiaris (dog): 100856414
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Entry
100856414 CDS
T01007
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X4
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100856414 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
100856414 (CPSF3)
03019 Messenger RNA biogenesis [BR:
cfa03019
]
100856414 (CPSF3)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100856414 (CPSF3)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100856414 (CPSF3)
U7-dependent histone pre-mRNA processing factors
100856414 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
CopK
Motif
Other DBs
NCBI-GeneID:
100856414
NCBI-ProteinID:
XP_003639652
Ensembl:
ENSCAFG00000003375
VGNC:
39575
LinkDB
All DBs
Position
17
Genome browser
AA seq
717 aa
AA seq
DB search
MGFSTSGSPWLCFLFTQTRAACSSPPLRRQISEMSAIPAEESDQLLIRPLGAGQEVGRSC
IILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKT
SFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVA
GIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTY
GTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIP
IYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMA
SPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMS
VDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN
PRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLA
MSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEELEIQEKPALKVFKNITVIQEPGMVVLEW
LANPSNDMYADTVTTVILEVQSNPKIRKGAVQKVSKKLEMHVYSKRLEIMLQDIFGEDCV
SVKDGSVLSVTVDGKTANINLETRTVECEEGSEDDESLREMVELAAQRLYEALTPVH
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggggttttctacctcaggttccccgtggctctgctttctgtttacgcagactcgcgcc
gcctgctcctcacccccgcttcgccgtcagatttcggagatgtctgcgattcccgccgag
gaaagtgaccagctgctgatccgaccccttggcgctggacaagaagtaggaagatcatgt
attatcctggagttcaaaggaagaaaaataatgctagactgcgggatccaccctggccta
gaaggaatggatgctcttccatatattgatttaattgacccagccgagattgatctcctg
ttaattagtcatttccatttggatcactgtggagctttgccctggtttctacagaagaca
agcttcaaaggaagaacatttatgactcatgctacaaaagctatttatagatggcttctt
tcagattatgtcaaagtcagtaacatatcggcagacgacatgctgtatacagaaacggat
ctggaagagagcatggacaaaattgaaactatcaacttccatgaagttaaagaagttgca
ggaatcaagttttggtgttaccacgcaggccacgttctgggagctgccatgttcatgatt
gagatcgcaggcgtgaagcttttgtacacaggcgacttctcaagacaagaagacagacac
ttaatggcagctgaaattcctaatattaaacctgatattcttattattgaatctacttat
gggacccatatccatgagaaacgcgaagagcgagaagcaagattctgtaacactgttcat
gacattgtaaacagagggggcagaggcctcattcctgtctttgcccttggaagggctcag
gagctgctcttgattttagatgagtattggcagaaccacccagaactccatgatatcccc
atatactacgcatcgtctttggccaagaagtgcatggcggtgtaccagacatatgtaaat
gccatgaatgacaaaatccgcaaacagatcaacatcaataatccctttgttttcaagcac
attagtaacctcaagagcatggatcattttgatgacattggtcccagcgtcgtgatggcc
tccccgggcatgatgcagagtggcttatccagagagctctttgaaagctggtgcacagat
aagaggaacggcgtcattatagcagggtactgtgtggaagggacacttgccaagcatatc
atgtctgagccagaagagatcactaccatgtctggacagaagctaccactgaaaatgtct
gttgattacatttctttctctgctcacacagattaccagcaaaccagtgaatttattcgt
gctttgaaaccgcctcatgtgattttagtccatggagaacagaatgaaatggccagattg
aaagcagccctgattcgagaatatgaggataacgatgaagttcacatagaggttcataat
cctcggaatacagaagctgtgaccttgaatttcagaggagaaaagctagccaaggtcatg
ggctttttagcagacaaaaaaccagaacaaggccagcgggtctcgggaatacttgttaaa
agaaactttaattatcacatactttctccttgtgacctctccaattatactgacttggcc
atgagcactgtaaaacagacccaagccattccctatactggcccttttaatctgctctat
tatcagctacagaaattgacaggtgatgtggaagagttagaaattcaagaaaaacctgct
ctgaaagtattcaaaaatattactgtcatacaggagccaggaatggtggtattagaatgg
ttagcaaacccttccaacgatatgtacgcagatacagtaacaaccgtgatactggaagtt
cagtccaacccgaaaatcaggaaaggtgcagtacagaaggtttctaaaaaattagaaatg
cacgtctatagcaagaggctggagatcatgctccaggacatatttggagaagactgtgta
agcgtaaaagatggttctgttctcagcgtcacagtggacgggaaaactgctaatataaac
ttggagacccggactgtagagtgcgaagaaggaagcgaggacgatgagtccctccgagag
atggtggagctcgccgcacagagactgtacgaggccctcacaccggtccactga
DBGET
integrated database retrieval system
