Canis lupus familiaris (dog): 100856566
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Entry
100856566 CDS
T01007
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1 isoform X5
KO
K16682
LIM domain-containing protein
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04390
Hippo signaling pathway
cfa04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100856566 (LIMD1)
04392 Hippo signaling pathway - multiple species
100856566 (LIMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
100856566 (LIMD1)
03036 Chromosome and associated proteins [BR:
cfa03036
]
100856566 (LIMD1)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100856566 (LIMD1)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
100856566 (LIMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf-ChsH2
Motif
Other DBs
NCBI-GeneID:
100856566
NCBI-ProteinID:
XP_003639802
Ensembl:
ENSCAFG00000014013
VGNC:
42679
UniProt:
A0A8C0T343
LinkDB
All DBs
Position
20:complement(42717543..42784125)
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AA seq
655 aa
AA seq
DB search
MDKYGDLGLEASKFIEDLNMYEASKDGLFRVDRGAGNNPEFEETRRVFATKMAKIHLQQQ
QQQLLQEETLPRGSRGAANGGAPQARREAGSGIRQPVDGAAKPPLASLAPGQPACPPPEQ
RARPPARGAGPGSQDCGAKEGLARWEMPAFRQPGPCEDPACLTHGDYYDNVPLPSPKWAD
QPGVSPSVRPGAGSGWPGAPGTDAPLPRPSRDHPLYQPPLSPSSAKSFESGRDGGAGGRA
DGKPAGLWTTASSQRVSPGLSSPGPENGALLGPTQPRTPSFLAPLAQSCPSQGALPRANS
GMGSEVAGAMPKPTVDPQAWFPDGPKSYLSSSVPPSSPGSMDSLQSGAAPGLGPKPVCTD
PGMGPKLSPTSLVHPPELSCKEGPPGWPSDGGLGPGLPESPSPPRVRLPCQTLIPGPELG
PSAAELKLEALTQRLEREMDAHPKADYFGACVKCSKGVFGAGQACQAMGNLYHDACFTCA
ACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDMILQALGKSYHPGCF
RCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPPEGSDETIRVVSMDR
DYHVECYHCEDCGLELNDEDGHRCYPLEDHLFCHSCHVKRLEKSPSSAALHQHRF
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtacggcgacctgggcctggaggccagtaagttcatcgaggacctgaacatg
tacgaggcatccaaggacgggctcttccgagtggacaggggggcgggcaacaaccccgag
tttgaggaaacacgcagggtgtttgccaccaaaatggccaaaatccacctccagcagcag
cagcagcagctcctgcaggaggagaccctgcccaggggcagccgcggcgccgccaacggg
ggcgccccccaggcccgccgggaagccggctcgggcatcaggcagccggtggatggtgcg
gccaagcctcctctggcctcgctcgcccctgggcagcccgcgtgcccacccccggagcag
agggccaggccgcccgcccgcggcgccggcccgggcagccaggactgcggggccaaggag
ggcctggcacgctgggagatgcccgctttccgccagccgggcccctgcgaggatcccgcc
tgcctcacccacggagactattacgacaacgtccccttgccgagccccaagtgggccgac
cagccaggagtgtcccccagcgtcaggccgggcgccggcagtgggtggcccggcgccccg
gggacggacgcgccgctgcccagaccctccagggaccatcccctgtaccagcctccgctc
tccccgagctccgccaagtcgttcgagagcggccgggatggcggtgctgggggtcgcgct
gatgggaagccagccgggctttggactaccgcctcctcgcagcgggtgagccccggcctc
tcttccccaggcccggagaacggggccctcctggggcccactcagcccaggaccccctct
ttcttagcacccttggcccagagctgccccagccaaggagctcttccgagagcaaactcg
gggatggggagtgaggttgcaggcgcgatgcccaagcccactgtggatcctcaagcctgg
ttcccagacggacccaaatcttacctctctagttccgtcccaccatcctcaccaggcagc
atggacagtctgcagtcgggtgcggcccctgggctgggtcccaagcccgtctgcacagac
cctggcatgggtcccaagctcagccccaccagccttgtccacccacctgagctgtcttgt
aaagaaggtccccccggctggccctccgatggcggcctggggcctgggctcccggagagc
cccagccccccccgggtgaggctgccctgccagacccttatcccaggccccgagcttggg
ccctcagctgccgaattgaaattagaagccctcacccaacgtctggagcgtgagatggat
gctcacccgaaggccgattactttggagcctgtgtgaaatgcagcaaaggggtgtttggg
gccggccaggcctgccaggccatggggaacctctaccacgatgcgtgcttcacctgtgca
gcctgcagccggaagctgagaggaaaagccttttattttgtcaacggcaaagtgttttgt
gaggaagacttcctgtactctgggttccagcagtctgctgacagatgttttctttgtgga
catctgatcatggacatgatcctacaggcccttgggaagtcctaccaccccggctgcttt
cgctgtgtcatctgcaacgagtgtttggacggggtgcccttcactgtggactctgagaac
aagatctactgtgtccgagattatcacaaggtgctggctcccaagtgtgcagcttgcggg
cttcccatccttccacctgagggctcagatgagaccatccgtgtcgtgtccatggacaga
gactaccacgtggagtgctaccattgcgaggactgcggtctggagctcaatgacgaagat
ggtcaccgctgctaccccctggaagaccacctgttctgtcactcctgccatgtcaagaga
ctggagaaaagcccctcatctgcagctcttcaccagcaccgcttctag
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