KEGG   Canis lupus familiaris (dog): 102151333
Entry
102151333         CDS       T01007                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03013  Nucleocytoplasmic transport
cfa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102151333
  09122 Translation
   03013 Nucleocytoplasmic transport
    102151333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfa03019]
    102151333
   03041 Spliceosome [BR:cfa03041]
    102151333
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102151333
Spliceosome [BR:cfa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102151333
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_IFT122_1st Beta-prop_IP5PC_F WDR54 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 102151333
NCBI-ProteinID: XP_038388008
Ensembl: ENSCAFG00000042084
LinkDB
Position
1:complement(68464038..68465597)
AA seq 307 aa
MTTPPQCGQRAYVMPVCVAFVVPRKKTTTKSKKPVVTFQAHDGPVYSMVSTDRHLLSAGD
GEVKAWLWAEILKKGCKELWQRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMD
LETGTFTRALRGHTDYVHCLALRERSPEVLSGGEDGAVRLWDLRTAKEVQTIEVCKHEEC
SRPHNGRWIGCLATDSDWMVCGGGPALTLWHLRSSTPTTIFPIRAPQKHVTFYQDLILSA
GQGLCVNQWQLSGELKAQVPGSSLGLLSLSLNQQPAAPECKVLTDTGNSCRMDVFTNLGY
RAFPLSF
NT seq 924 nt   +upstreamnt  +downstreamnt
atgacgacacctccgcaatgtggacaacgagcatatgtcatgcccgtctgtgttgccttc
gtggtccctaggaaaaaaacgacgacaaaaagtaagaagccagtggtgacattccaagcc
catgatgggccggtctacagcatggtctccacggatcgacatctgctcagtgctggggat
ggggaagtgaaggcctggctttgggcagagatcctcaagaagggttgtaaggagctgtgg
cagcgtcagcccccatacaggaccagcctagaagtgcctgagatcaatgctttgcttctc
gtccccaaggagaattctctcatcctggcagggggagactgtcagttgcatacgatggac
cttgagaccgggaccttcacacgggccctccggggccacacagactatgtccactgcctg
gcactgcgggagcggagtcctgaggtgctgtcaggtggagaggatggagccgtgcgactt
tgggacctccgcacagccaaggaagtccagaccattgaggtatgtaagcatgaggagtgc
tcgaggccacacaatgggcgttggatcggctgtttggccactgactcagactggatggtc
tgtggaggaggcccagcactcaccctctggcacctccgatcctccacacccacaactatt
ttccccatacgggcgccacagaaacacgtcaccttctaccaggacctgattctgtcagct
ggccagggcctctgtgtcaaccagtggcagctgagtggggagctcaaggcgcaggtgcct
ggctcctccctagggctgctcagcctcagtctcaaccagcagccagcagcacccgagtgc
aaggtcctgacagacacaggtaacagctgccgcatggatgtcttcacgaatctcggctac
cgcgccttccccttgtccttctga

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