Canis lupus familiaris (dog): 102151333
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Entry
102151333 CDS
T01007
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03013
Nucleocytoplasmic transport
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102151333
09122 Translation
03013 Nucleocytoplasmic transport
102151333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
102151333
03041 Spliceosome [BR:
cfa03041
]
102151333
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102151333
Spliceosome [BR:
cfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102151333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
WDR54
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
102151333
NCBI-ProteinID:
XP_038388008
Ensembl:
ENSCAFG00000042084
LinkDB
All DBs
Position
1:complement(68464038..68465597)
Genome browser
AA seq
307 aa
AA seq
DB search
MTTPPQCGQRAYVMPVCVAFVVPRKKTTTKSKKPVVTFQAHDGPVYSMVSTDRHLLSAGD
GEVKAWLWAEILKKGCKELWQRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMD
LETGTFTRALRGHTDYVHCLALRERSPEVLSGGEDGAVRLWDLRTAKEVQTIEVCKHEEC
SRPHNGRWIGCLATDSDWMVCGGGPALTLWHLRSSTPTTIFPIRAPQKHVTFYQDLILSA
GQGLCVNQWQLSGELKAQVPGSSLGLLSLSLNQQPAAPECKVLTDTGNSCRMDVFTNLGY
RAFPLSF
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacctccgcaatgtggacaacgagcatatgtcatgcccgtctgtgttgccttc
gtggtccctaggaaaaaaacgacgacaaaaagtaagaagccagtggtgacattccaagcc
catgatgggccggtctacagcatggtctccacggatcgacatctgctcagtgctggggat
ggggaagtgaaggcctggctttgggcagagatcctcaagaagggttgtaaggagctgtgg
cagcgtcagcccccatacaggaccagcctagaagtgcctgagatcaatgctttgcttctc
gtccccaaggagaattctctcatcctggcagggggagactgtcagttgcatacgatggac
cttgagaccgggaccttcacacgggccctccggggccacacagactatgtccactgcctg
gcactgcgggagcggagtcctgaggtgctgtcaggtggagaggatggagccgtgcgactt
tgggacctccgcacagccaaggaagtccagaccattgaggtatgtaagcatgaggagtgc
tcgaggccacacaatgggcgttggatcggctgtttggccactgactcagactggatggtc
tgtggaggaggcccagcactcaccctctggcacctccgatcctccacacccacaactatt
ttccccatacgggcgccacagaaacacgtcaccttctaccaggacctgattctgtcagct
ggccagggcctctgtgtcaaccagtggcagctgagtggggagctcaaggcgcaggtgcct
ggctcctccctagggctgctcagcctcagtctcaaccagcagccagcagcacccgagtgc
aaggtcctgacagacacaggtaacagctgccgcatggatgtcttcacgaatctcggctac
cgcgccttccccttgtccttctga
DBGET
integrated database retrieval system