Canis lupus familiaris (dog): 102152687
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Entry
102152687 CDS
T01007
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X13
KO
K24356
collagen type XXV alpha
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102152687 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cfa00536
]
102152687 (COL25A1)
Glycosaminoglycan binding proteins [BR:
cfa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102152687 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102152687
NCBI-ProteinID:
XP_038317940
Ensembl:
ENSCAFG00000011361
VGNC:
57403
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All DBs
Position
32:12454708..12899162
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AA seq
693 aa
AA seq
DB search
MLVKKHAGKGGGREPGSENPRPAGQRCAWPVPPCTALAALLSVVAVMSCLYLGVKTNHLQ
ARIAALESAKGDTSVHLLPDCLDQLKAMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ
LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG
PPGQKGSVGVPGIPGVNGQKGEPGLPGTVGQNGIPGPKGEPGDQGEKGDPGENGPKGDTG
EKGDPGSSAAGIKGEPGESGRPGQKGESGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT
KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGALGPRGPPGQK
GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEPGSPGIPGVDGEQGL
KGSKGDMGDPGMPGEKGGIGLPGLPGANGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPP
GPMGPHGLPGPKGEPGLNGVKGLKGEPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPP
GPAGPKGERGEKGVMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDVGEKGEKGFRGVK
GEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaagaagcatgcagggaagggtggaggtcgggagccaggctccgagaacccg
agacccgccgggcagcgttgtgcctggcccgtgcccccgtgcaccgccctggcggccctt
ctgtcagtggtggccgtgatgtcttgtctgtacctgggggtgaaaaccaaccacctccag
gcgaggatcgctgctctcgaatccgcaaaaggggacacttccgtccatctgcttcccgat
tgcctggatcagctcaaagcaatggtgcaagagaaagtggagcgacttctggctcagaaa
tcctatgaacatatggctaaaataagaattgccagagaagcaccttcagagtgcaactgc
ccagcaggccctccggggaaacgaggtaagaggggccgaagaggagaatctggtcctcct
ggtcaacctggtcctcagggccctcctggtccaaaaggtgataagggagaacaaggtgat
cagggacctcggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcag
ctcattaaacgccgcctcattaagggtgaccaaggacaggctgggcctccaggacctcca
ggcccccctggcccaagagggcctccaggggacacagggaaagatggcccccgtggaatg
ccaggagtgcctggtgaaccagggaaaccaggagaacaaggcttgatgggtcctctgggg
cctccgggacaaaagggttctgttggagtacctggaattccaggagtgaatggtcaaaag
ggtgagcccgggttgcctggaacagtaggacaaaacggaataccagggccaaagggagaa
cctggagatcaaggtgaaaagggagatcctggagagaacggtcccaaaggtgacacaggc
gaaaagggtgaccctggatcatctgctgcaggaattaagggggaacctggagaatctggt
cgtccaggacaaaagggtgaatcagggcttcctgggcttcctggacttccggggataaag
ggagaaccaggtttcattggtcctcaaggagaaccaggcttaccagggttaccaggcaca
aagggtgaacgtggagaggcaggacctcctggaagaggtgaacgaggagagcctggagcc
cctggaccaaagggaaaacaaggtgaatcaggaactagagggccaaaggggtcaaagggt
gatcgtggagagaaaggggactctggagccctgggaccaaggggtccacctggtcaaaag
ggagatcagggagccaccgagatcatagactacaatggcaacctccacgaagccttgcag
aggattaccaccttaactgtcacgggtccccctggaccacctggacctcaaggactacaa
gggccaaagggagagccaggatctccaggaatcccaggagttgatggagagcagggactt
aaaggctcaaaaggagatatgggggacccaggcatgccaggtgaaaaaggaggaatcgga
cttcctggattaccgggtgccaatggaatgaaaggagaaaaaggagactccgggttgcca
ggtcctcagggtccttctatcataggcccaccaggcccaccaggcccccatggcccacca
ggccccatgggaccccatggacttcctggaccaaagggtgaaccagggttaaatggtgtt
aaaggattgaagggtgaaccaggtcaaaagggtgacagaggaccccttggtcttccagga
gcgtctggcttagatggaaagccaggatcccggggtacagatggccctatgggaccccct
ggccctgcaggtcccaaaggagaaagaggtgaaaaaggagtcatgggagagcctggaccc
agaggaccctatggtctgcctgggaaagatggagagcctggtcttgatggcttccctggt
ccacgaggcgagaagggtgatgtaggagaaaagggagaaaagggattccgtggcgttaag
ggggaaaaaggggagccaggccagcctggcctggatgggctggatgccccttgccaattg
gggccagatggattacccatgcctggctgttggcaaaagtga
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