Canis lupus familiaris (dog): 102153271
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Entry
102153271 CDS
T01007
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
102153271 (SCAF8)
03041 Spliceosome [BR:
cfa03041
]
102153271 (SCAF8)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102153271 (SCAF8)
Spliceosome [BR:
cfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102153271 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102153271
NCBI-ProteinID:
XP_038376409
Ensembl:
ENSCAFG00000000570
VGNC:
53973
UniProt:
A0A8C0MS11
LinkDB
All DBs
Position
1:45392943..45614868
Genome browser
AA seq
1292 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQLQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQGVAFNKKLMDRFDFGEDSEHSEEP
KKEISASQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEANLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVA
MLQIPVAPAVPAVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPP
PVVPPPTIPPVVPTSLVQPPLSMTPETVKDVGFGSLVLPGGSVASNLATPTLPAGNVFNP
PTKQAEPEEKVPHLIEHQISSGENTRSVIPNDIPSSSAILGGQPPNVTSNSGILGVQRPN
VSSNSEIIGVRPSNVSNSSGIIGPQPPNILNNSGILGLQPPTVSSSSGLLGVLPPNIPNN
SGLIGVQPPNVPNAAGLLGTQPPAGPQNLPPLNLSSQRMPAMPMLDIRPGLIPQTPGPRF
PLMQPGIPPQRGIPPPSVLDSALHPPPPRGPFPPGDIFSQPERPFLVPGRQNVDNVPNPE
KRIPLGNDNIQQEGDRDYRFPPIEARESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRD
HFGRPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRDFDEREHRVLPVYGGPKGLHEE
RGRFRSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRLG
RDRIQNTWVPPPHARVFDFFEGATSQRKGDNVPQVNGENTERHAQPPPLPVQNDPELYEK
LTSSSEINKEKSDTVADIESEPVVESTETEGT
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaaaaccttcaacagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattgtattccctgaatgactacaaacca
cccatttctaaagcaaaaatgacccaaattactaaggcagccatcaaagctattaagttc
tataaacatgtggtacagagcgttgagaaattcattcagaaatgtaaaccagaatacaag
gtacctggactttatgttattgactccattgtacgacaatctcgacatcagtttggtcaa
gaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtactaaatctatggcagaag
aataatgtgtttaagagtgagattattcagcctcttttggatatggcagcagggatacct
cccccagttgttacacctgttttggccagtactactgcagctatgagcaataccccagga
actcctgttacacctgttactccagccaatgtggtccagggtttaccggatccatgggta
tctcagataacaaacacagatacacttgcagcagtagctcaaatcctacaaagtcctcaa
ggccaacagcttcagcagttgatacagactttacaactacaacagcaaaagcctcagcct
tctattcttcaggccctggatgctggtcttgttgtgcagttgcaggctctcacagcacag
cttactgctgcagctgcagcggccaacaccctgaaccccttagaacagggagtggctttc
aacaagaagttgatggataggtttgattttggggaagattctgagcatagcgaagaacct
aaaaaggaaatttcagcttctcaactttctcatgtttcagaatctgtgaacaattccatt
tttcatcagatagcagaacaactacaacagcaaaaccttgaacatctcagacagcaactc
ctagaacagcaacagcctcaaaaggcaacccctcaggatagtcaagagggaacatttgga
tcagagcattccgcatcaccatcacaagggagcagtcaacagcatttccttgaacctgaa
gcaaatttggatgattctatagatattcaacaacaggatatggatatagatgaaggacaa
gatggagtagaagaggagatctttgaacaggaagcaaagaaagtggctgttcgctcaaga
tcaagaacacattcacgatctcgttcaagatcaccaagaaaacgaaggtctcggtcacga
tctggttctcgaaagcgtaaacacagaaagcgatcacgctcacgctcaagagaaagaaag
aggaaatcatcacgttcatactcaagtgaaaggagagcaagagaaagggagaaagaacga
cagaagaagggattacctccaattagatctaaaacattaagtgtatgtagtactactttg
tgggttggtcaggtggataagaaggcaactcagcaagatttaaccaatctgtttgaagag
tttggacaaattgaatccattaatatgattcctcccaggggctgtgcttacgtctgcatg
gttcatcgacaagatgcttttcgggctcttcagaaacttagttccggatcatataaaatt
gggtccaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatataaa
caattctgggatgtggatcttggagttacatatataccgtgggaaaaagttaaagtggat
gatttggaaggttttgcagaaggaggcatgattgaccaggaaactgtaaatactgagtgg
gaaactgtgaaaagctcggaacctgttaaagagacagtccagacaactcagagcccaact
ccggttgaaaaggagacagtggtcacaacccaggcagaggtttttcctccacctgttgcc
atgttacagattccagtagcgccagctgtgcctgcagttagtttagtcccaccagcattt
cctgtctccatgccagttcctcctcctggattcagtccaatccctccacctccttttctg
agagcaagttttaacccttcacaaccacctcctggtttcatgccacctccagttccacca
cctgttgtaccaccacctactattccaccagtagtaccaacatctttagtgcagccacca
ttatccatgactccagaaactgtgaaagatgttggatttggtagtcttgttttaccgggt
ggttctgttgccagcaatcttgctactcccactctgccagctggaaatgtttttaatcct
ccaactaaacaagcagagcctgaagaaaaagtacctcatcttatagagcaccagatttca
tctggtgaaaacacaagatcagtgattccaaatgatattccaagtagctctgcaatttta
ggaggacagccgccaaatgtgacaagtaattctggaattctgggagtccaaagaccaaat
gtatcgagtaattctgaaattattggagtccggccatctaatgtttccaatagttctggg
attattggaccccagccaccaaatattctgaataactctggaattttgggactacagcca
ccaactgtgtcaagtagttctggacttttgggagtgctacccccaaatatccctaataat
tccggacttataggagtacagccaccgaatgttccaaatgctgctggacttttgggaaca
caaccaccagctgggcctcaaaacttaccccctttaaatctctctagtcaaaggatgccc
gcaatgccaatgttagacattcgtccaggactaataccacagacacctggaccaagattc
cctttaatgcagcctggaattccaccccaacggggaatccctcccccatcagtacttgat
tcagctcttcatccaccaccacctcgtggtccttttcctccaggagatatttttagtcag
ccagaaagaccttttctagtccctggaagacaaaatgtagacaatgttcctaatccagag
aaaaggataccacttggaaatgataacattcaacaggaaggagatagagattaccggttt
cctcccattgaagccagggaaagcattagtagacctcccccggtggatgttagggatgtg
gttggacggcctatagatccaagagaaggtcctggaaggcctccattagatggtagggat
cattttggaagacctcctgtcgatattagagagaatcttgtgaggccaggcatagatcat
cttggtcgaagagaccattttggctttaatccagagaagccctgggggcatagagatttt
gatgagagagaacatcgggttctacctgtctatggtggtccaaaaggcttacatgaagaa
agaggtagatttcgatctggaaactatcgatttgatcctagaagtggtccttggaacaga
ggatttggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaa
agggatagggatgacagagattttgatttctgcagagaaattaatggaaaccgtcttgga
cgagatagaattcaaaacacctgggtcccccctcctcatgctcgggtttttgattttttt
gaaggggccacttctcaacgaaaaggtgataacgtgcctcaggttaatggtgaaaatact
gaaagacatgcccaaccaccacctttaccagtgcagaatgatcctgaactttatgaaaaa
ctgacatcttcaagtgaaataaacaaggagaagagtgacacagttgctgatatagaaagt
gaaccagtggtagaaagcacagaaactgaggggacataa
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