Canis lupus familiaris (dog): 102154474
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Entry
102154474 CDS
T01007
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03018
RNA degradation
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102154474
09123 Folding, sorting and degradation
03018 RNA degradation
102154474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
102154474
03041 Spliceosome [BR:
cfa03041
]
102154474
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102154474
mRNA degradation factors
5'-3' decay
Lsm complex
102154474
Spliceosome [BR:
cfa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102154474
Complex C
U2 snRNP components
102154474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
102154474
NCBI-ProteinID:
XP_038315386
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All DBs
Position
26:8590025..8593038
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVHYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctattcctttttcaagtccctggtgggcaaggatgtggtcgtggaactcaag
aatgacctgagcatctgtggaaccctccattctgtggatcagtatctcaacatcaaacta
actgacatcagtgtcacagaccctgagaaatatcctcacatgttgtcagtgaagaactgc
ttcatccgtggctcagtggtccactacgtgcagttgccggcagatgaggtggacacacag
ttgctgcaggatgcagcgaggaaggaggccttgcagcagaaacagtga
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