Canis lupus familiaris (dog): 119866251
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Entry
119866251 CDS
T01007
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant isoform X4
KO
K14407
cleavage stimulation factor subunit 2
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119866251 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
119866251 (CSTF2T)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119866251 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
119866251 (CSTF2T)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119866251
NCBI-ProteinID:
XP_038315146
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Position
26:36151251..36153709
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AA seq
620 aa
AA seq
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MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPVVDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARSMLLQNPQLAYALLQAQVVMR
IMDPDLALRILHRKVHVTPLLPGKAQPGPGPGPGPGPGPGLGPGPGPGPGPAAPAVLLAQ
QSPAAPQPPHLARRPVKDIPPLMQTPIQAGMPAPGPLPAAGPGPGPAALPAAGGMQPQVG
MPGVGPLERGQVQMADPRAPLPRGPMAAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRG
YLGPPLHHASGHARDSHDLRGGPLADPRLLMGEPRGPMMDQRGLPMDGRGSRDSRGMETE
VLETRVLERRGMETCAMEARGMDARGMEMRGPGPGPGSRGPMTGGIQGPGPINMGAGGPQ
GPRQVSGISGVGNPGAGMQGAGMQGGGMQGAGMQGGGMQGAGMQGGGMQGAGMQAGMQGG
GMQGAGMQAVGMQGAGKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPP
EQRQSILILKEQIQKSTGAS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcctggcggtgcgggacccggccatggaccggtcgctgcgctccgtgttcgtg
gggaacatcccgtacgaggcgacggaggagcagctgaaggacatcttctcggaggtgggc
tcggtggtgagcttccggctggtgtacgaccgcgagacgggcaagcccaagggctacggc
ttctgcgagtaccaggaccaggagacggcgctgagcgcgatgcgcaacctcaacgggcgc
gagttcagcggccgcgcgctgcgcgtggacaacgccgcgagcgagaagaacaaggaggag
ctcaagagcctgggccccgccgcgcccgtcgtggactcgccctacggcgaccccatcgac
cccgaggacgcgcccgagtccatcacgcgcgccgtggccagcctgccgcccgagcagatg
ttcgagctcatgaagcagatgaagctgtgcgtgcagaacagccaccaggaagcgcgcagc
atgctgctgcagaacccgcagctggcctacgcgctgctgcaggcgcaggtggtcatgcgc
atcatggaccccgacctggcgctcaggatcctgcaccgcaaggtccacgtgacgccgctg
ctgcccggcaaggcgcagcccggccccggccccggccccggccccggccccggccccggt
ctcggccccggccccggccccggccccggccccgccgccccggccgtcctgctggcccag
cagagccccgccgccccgcagccgccgcacctggcgcggaggcccgtgaaggacatcccc
ccgctgatgcagaccccgatccaggccggcatgccggcgccgggccccctgcccgccgcg
gggccgggccccgggcccgccgcgctccccgccgcgggcggcatgcagccgcaggtgggg
atgcccggcgtggggcccctggagcgcggccaggtgcagatggccgaccccagggcgccc
ctgccgcgggggcccatggccgcggggggcctccctcctcgggggctgctgggggacgcc
ccgaacgacccccgcggggggaccctgctctcggtcaccggggaggtggagccccgaggc
tacctgggcccgcccctgcaccacgcgtccggccacgccagagactcgcacgacctgcgg
ggcgggcccctcgccgaccccagactgctgatgggagagccccgggggcccatgatggac
cagagggggctccccatggatggcagagggagcagagattctcgagggatggagacggaa
gtcctagagaccagagtgctggagagaagagggatggagacctgtgcgatggaagccaga
ggcatggacgcgagagggatggagatgcggggccccggccccggccccggttccagaggc
ccaatgactgggggaatccaggggcccgggcccattaacatgggggcgggtggtcctcag
gggcccagacaggtgtcgggcatttcaggggtgggaaatcctggagctggcatgcagggg
gcgggcatgcaaggagggggcatgcagggggcaggcatgcaaggagggggcatgcaggga
gcaggcatgcaaggagggggcatgcagggggcaggcatgcaggcaggcatgcaaggagga
ggcatgcagggggcaggcatgcaagcagtgggcatgcagggggcaggcaagcaaggtgga
ggccagcctagcagtttcagtcctgggcagagccaggtaactccacaggatcaggaaaag
gcagctctgatcatgcaggttcttcagctgactgcagatcagattgccatgctgcccccc
gagcagaggcagagcatcctgatcttaaaggaacagattcagaagtctactggggcttct
tga
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