Canis lupus familiaris (dog): 119871417
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Entry
119871417 CDS
T01007
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor, proline- and glutamine-rich-like isoform X4
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfa01009
]
119871417
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
119871417
03041 Spliceosome [BR:
cfa03041
]
119871417
Protein phosphatases and associated proteins [BR:
cfa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119871417
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119871417
Spliceosome [BR:
cfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119871417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOPS
RRM_1
SMIM43
Motif
Other DBs
NCBI-GeneID:
119871417
NCBI-ProteinID:
XP_038342072
LinkDB
All DBs
Position
4:complement(54767018..54772956)
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AA seq
836 aa
AA seq
DB search
MKQEGKTMVAAGFPALESVPCDLGLCPPPSCAKQGGLRVPRASSPLLPRPPLDHRHVSGR
FRSRGGSRGGLHDFRSPPPGMGLNQNRGPMGPGPGQGGPKPPIPSPPPHQQQRQQPPPXQ
PPPPPPPQDSSKPVGPQGPGPARPASGSAAPPASGSAPPATPPTSGAPAGPGPTPPPPPA
VTVTSAPPGAPPPAPTSSGVPTTPPQAGGPPPPAGPAGGPRPGPKQGPGPGGPKGGKMPG
GPEXTPRGHPKPPGRGVGGREPRGGPQHRPPFQQQQHRGPXPGGRSEEKMSDSEGFKANL
SLLRRPGEKTYTRRCWLFLGTLPADIMEDEFKRLXAKFGEPGEVFINKGKGFGFIKLESR
ALAEIAKPELDDTPMRGRQLRVRFATHAATLSARNLSPYVSNEVLEEAFSHFGPIERAVV
IVDDRGRSTGKGIVEFASKPVARKAFERCGEGVFLLTTTPRPVIVEPLEQLDDEDGLSEK
LAQKNPMYQKERETPPRVAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLENE
MEDAYHEHQANLLRQDLMRCQEELRRMEEFHNQEMQKCKEMQLRQEEERRRREEEMIRQR
EMKEQMRRQREESYSRMGYVDPRERDMRMGGGGAMNMGDPYGSGGQKFPPLGGGSGIGYE
ANPGVPPATMSGSMMGSDMRTERFGQGGAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNK
KPRLYFILFFLFFFFNFYLFMIVTHREREREAETQTEGEAGSMHREPDVGFDPGSPGSRP
GPKAGAKPLRHPGIPKAPVLDVISRFSFQFVFVFSCLDTNLLNSCILVRKLPFYGC
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagaaggaaaaacaatggtggcggccggatttccagccctggagtcagttccc
tgcgatctaggcctgtgtcctccgccatcttgtgcgaagcaaggtggcctccgcgttccc
cgagcgtcttctccgcttctgcctcgaccgccccttgatcacagacatgtctcgggacgg
ttccggagccgcggcggcagccgcggtggcctccacgacttccgctccccgccgcccggc
atgggcctcaatcagaaccggggacccatggggcccggcccgggccagggcggccccaaa
cccccgatcccgtcaccacctccgcaccaacagcaacggcagcagccgccgccanntcag
ccgccgccgccgccgccgccgcaggactcgtccaagcctgtgggtcctcaggggccgggc
ccggcccggcctgcctccgggagtgcagcgccccccgcctccggctcggcaccgcccgcg
actcctccgacctcgggggcccctgcgggcccgggccccaccccgcccccgccgcccgcg
gtcaccgtcacctcggcgccgcctggggcgcccccgcccgcgccgacgagcagcggggtc
cccaccaccccgccccaggccgggggcccgcctccgcccgcagggcccgcagggggcccg
cgcccggggcctaaacagggcccaggccccggaggcccgaaaggcggcaaaatgccgggc
gggcctgagnntaccccccgcggccaccccaagccgccggggcggggggtgggggggagg
gagccgcgcggagggccgcagcaccgcccgcccttccagcagcagcagcaccgggggccc
ncgcccggcggccgcagcgaggagaagatgtccgactcggaggggttcaaagccaacttg
tctctcctgaggaggcccggagagaaaacctacacgcggcgctgctggttgtttctgggg
actctacctgcggacatcatggaggatgaattcaaaagactcnntgctaaattcggagaa
ccaggagaagtttttatcaacaaaggcaaaggatttgggtttattaaacttgaatctagg
gcactggctgaaattgccaaacctgaactcgatgatacacccatgaggggtaggcagctt
cgggttcgctttgccacacatgctgctaccctgtcggcgcgaaatctttcaccttatgtt
tccaacgaagtgttggaagaagcctttagccactttgggcctattgagagggctgttgta
attgtggatgatcgtgggagatctacagggaaaggcattgttgaatttgcttctaaacca
gtggcaagaaaagcatttgaaagatgcggcgaaggtgttttcttactgacaacaacgcct
cgtccagtcattgtggaaccacttgaacaattagatgatgaagatggcctttctgaaaaa
cttgcacagaagaatccaatgtatcaaaaggagagagaaacgcctcctcgtgttgcccag
catggcacatttgagtatgaatattctcagcgatggaagtccctggatgaaatggaaaaa
cagcaaagggaacaagttgaaaaaaacatgaaagatgcgaaagacaaattggaaaatgaa
atggaagatgcctatcatgagcatcaggcaaatcttttgcgtcaagatctgatgagatgc
caggaagaattaagacgcatggaagaatttcataatcaagaaatgcagaaatgtaaagaa
atgcaactaaggcaagaagaagaacggcgtagaagggaagaagagatgattcggcagcgt
gagatgaaagaacaaatgagacgccaaagagaggaaagttatagccggatgggctacgtg
gatccaagagaaagagacatgagaatgggtggtggaggagcaatgaacatgggagatccc
tatggttcaggaggccagaaatttccacctctaggtggtggcagtggcataggttatgaa
gctaatcctggagtcccgccagcaaccatgagtggttccatgatgggaagcgacatgcgt
actgagcgctttgggcagggaggtgcgggacctgtgggtggacagggtcctagaggaatg
gggcctggaactccagcaggatatggtagagggagagaagagtatgaaggcccaaacaaa
aagccccgactttattttattttattttttttattttttttttttaatttttatttattt
atgatagtcacacacagagagagagagagagaggcagagacacagacagagggagaagca
ggctccatgcaccgggagcccgacgtgggattcgatcctgggtctccaggatcgcgccct
gggccaaaggcaggcgccaaaccgctgcgccacccagggatcccaaaagccccggtttta
gatgtgatatctaggttttcattccagtttgtttttgtcttttcttgtttagataccaat
cttttaaattcttgcattttagtaagaaagctacctttttatggatgttag
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