Canis lupus familiaris (dog): 119871576
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Entry
119871576 CDS
T01007
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03008
Ribosome biogenesis in eukaryotes
cfa05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119871576 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
119871576 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
119871576 (DROSHA)
03009 Ribosome biogenesis [BR:
cfa03009
]
119871576 (DROSHA)
03036 Chromosome and associated proteins [BR:
cfa03036
]
119871576 (DROSHA)
Enzymes [BR:
cfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
119871576 (DROSHA)
Messenger RNA biogenesis [BR:
cfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
119871576 (DROSHA)
Ribosome biogenesis [BR:
cfa03009
]
Eukaryotic type
90S particles
RNase
119871576 (DROSHA)
Prokaryotic type
rRNA processing factors
119871576 (DROSHA)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
119871576 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
119871576
NCBI-ProteinID:
XP_038356536
LinkDB
All DBs
Position
4:75406973..75528472
Genome browser
AA seq
1336 aa
AA seq
DB search
MQGNTCHRMSFHPGRGCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPST
TFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRPPFPVPPCFPPMP
PPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPN
FNSFQNNPSSFPPSANNSTSPHFRHLPPYPLPKAPSERRSPERLKHYEDHRHRDHSHGRG
ERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDSRRSP
SLERSYKKEYKRSGSHSPSREKKRARWEEEKDRWSDSQSTGKEKNYTSIKEKEPEETLPD
KNEEEEEELLKPVWIRCTHSENYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEK
AKAARPPWEPPKTKLDEDLESSSESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRL
HDELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVKGLELFSLFLFRDILELYDWNLKGPLFEDNPPCCPRFHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKL
AQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMH
LDKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMR
KKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLAT
YRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNDPDLREVWLNYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWE
REHQEKEPDETEDIKK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcaatacgtgtcatagaatgtcgttccatccaggacgagggtgtccccgaggg
cgaggaggacatggagccagaccctcagccccagccttcaggcctcaaaatctgagacta
cttcatcctcagcagcctcctgtgcaatatcaatatgaacctccaagtgccccttccacc
acgttctcgaactctccagcccccaattttctgcctccacgaccagactttgtccccttc
cctcctcccatgcctccgtcagcccagggccctcttcccccctgccctatacgccccccc
ttcccaaatcaccagatgaggccccccttcccagtgcctccttgttttcctcctatgcca
cctccaatgccctgtcctaataaccccccagtccctggagcacctcctggacagggcact
ttccctttcatgatgccccctccttccatgccccaccccccaccccctccggtcatgcca
cagcaggtcaattatcagtaccctccagggtactcacaccataatttcccacctcccaat
tttaatagcttccagaacaaccccagttcttttccacccagtgctaataacagcactagt
ccccattttaggcacctccctccataccccctcccaaaggctcccagtgagagaaggtcc
cctgaaaggctcaagcactacgaggatcacaggcaccgggatcacagtcacggccgaggc
gagaggcatcggtccctggatcgacgggaacgaggccgaagtcctgacaggagaagacaa
gatagccgctacagatcagattacgaccgagggagaacgccctcccgtcaccggagctat
gagcggagcagagagcgggaacgggagagacacaggcaccgggacagccgaagatcacca
tctctggaaaggtcctacaaaaaagagtataagagatctggaagtcactccccaagtagg
gagaaaaaaagagctcgttgggaggaagagaaagacagatggagtgacagccagagcact
ggcaaagagaagaattatacctcaatcaaggaaaaagagccggaggagacactgcctgac
aaaaatgaggaggaggaagaagaacttcttaagcctgtgtggatccgctgcacccactca
gaaaactactactccagtgaccccatggatcaggtgggagattctactgtggttggaaca
agtaggcttcgtgacttatatgacaaatttgaggaagaactggggagtaggcaagaaaag
gccaaagctgctagacctccgtgggagcctcccaagacaaagctagatgaagatttggag
agttccagtgaatctgaatgcgagtctgatgaggacagcacctgttcgagcagctcagac
tctgaagttttcgacgtcattgcagaaatcaaacgcaagaaggcccatcctgaccgactt
catgatgaactttggtacaatgacccaggccagatgaatgatgggccactctgcaaatgc
agcgccaaagcaagacgcacaggaatcaggcacagcatttatcctggagaagaggccatc
aagccctgtcgtcctatgaccaacaatgctggcagacttttccactatcgaattacagtc
tcccctcctaccaactttttgactgacaggccaactgttatagaatatgatgatcatgag
tatatctttgaaggattttctatgtttgcacatgcccccctgaccaatattccactgtgt
aaagtaattaggttcaacatagactacacaatccatttcatcgaggagatgatgcctgag
aatttttgtgtgaaaggacttgaactcttttcgttattcctgttcagagatattttggaa
ttgtatgactggaatcttaaaggccctttgtttgaagacaatcctccctgctgcccaaga
tttcatttcatgccacgttttgtgagatttcttccagatggaggaaaggaagtgctgtcc
atgcaccagattctcctttacttattacgatgtagcaaagccctggttcccgaagaggag
atcgccaatatgcttcagtgggaagaacttgagtggcagaaatatgcagaggaatgcaaa
ggcatgattgtcaccaatcctggaacgaaacctagctctgtccgcattgatcaactggat
cgtgaacagttcaaccctgatgtgattacctttccgattatcgtccactttgggatacgc
cctgcacagttgagttatgcaggagacccacagtaccagaaactgtggaagagttatgtg
aaacttcgccacctcctagcaaatagtcccaaagttaaacaaactgacaaacagaagctg
gcacaaagagaggaagcactccaaaaaatacgacagaagaatacaatgaggcgagaagta
acagtggagctaagtagtcaaggattttggaaaactggcatccgttctgatgtctgtcag
catgcaatgatgttacctgttttgacccatcatatccgctaccaccaatgcctaatgcat
ctagacaagttgataggatatactttccaagatcgttgtctgttacagctggccatgact
catccgagtcatcacttaaattttggaatgaatcctgatcatgccaggaattctttatct
aactgtggaattcggcagcccaaatatggagatagaaaagttcatcacatgcacatgagg
aaaaaaggaattaacaccttaataaatattatgtcacgccttggccaagatgacccaact
ccctcaaggattaatcacaatgaaaggttggagttcctaggtgatgctgttgttgaattt
ctgacaagtgtccatttgtactatttgtttcctagtctagaagaaggaggattagcaact
taccggactgccattgttcagaatcaacaccttgccatgttagcaaagaaacttgaactg
gatcgatttatgctttatgctcatggacctgacctttgtagagaatcagaccttcgacat
gcaatggctaattgttttgaagcattaataggagctgtttacttggagggaagcctggag
gaagccaaacagttatttggacgcttactctttaatgatccggacctgcgagaagtttgg
ctcaattatcctctccacccactccaactacaagagccgaatactgatcgacaacttatt
gagacttctccagttttacagaaacttactgagtttgaagaagcaattggagtaattttt
actcatgttcgacttctggcaagagcattcacgttgagaactgtgggatttaaccatctg
accctaggccacaatcagaggatggaattcctaggtgactccataatgcagctggttgcc
actgagtacttatttattcatttcccagatcatcatgaaggacacttaactttgctgcga
agctctttggtgaataacagaactcaggccaaggtagcagaggagctgggcatgcaagaa
tatgccatcaccaacgacaagaccaagagacctgtggcccttaggaccaagaccttggca
gaccttttggaatcatttattgcagcgctgtacattgataaggatttagaatatgttcat
actttcatgaatgtttgcttctttccacgattaaaagagtttattttgaatcaggattgg
aatgaccccaaatcccagcttcagcagtgttgcttgacactcaggacagaaggaaaggag
ccagacattcctctgtacaaaacgctgcagacggtaggaccctcccatgctagaacctac
actgtggcagtgtactttaagggagaaagaataggctgtgggaaaggaccaagtattcag
caagcagaaatgggagcagcaatggatgcacttgaaaaatataactttccccagatggcc
catcagaagcggttcattgaacggaagtacagacaagagttaaaagaaatgaggtgggaa
agagagcatcaagagaaagagccagatgagactgaagacataaagaaataa
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integrated database retrieval system
