Canis lupus familiaris (dog): 403467
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Entry
403467 CDS
T01007
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain precursor
KO
K16628
collagen type VII alpha
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
403467 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
VWA_2
Pur_ac_phosph_N
Kunitz_BPTI
Ig_DSCAM-DSCAML_C
DUF4992
Motif
Other DBs
NCBI-GeneID:
403467
NCBI-ProteinID:
NP_001002980
Ensembl:
ENSCAFG00000012403
VGNC:
39483
UniProt:
Q7YRK8
LinkDB
All DBs
Position
20:40436737..40467232
Genome browser
AA seq
2936 aa
AA seq
DB search
MRLPLLVAALCAGILAGALRVRAQQRERVTCTRLYAADIVFLLDGSSSIGRGNFREVRGF
LEGLVWPFSGAASAQGVRFAAVQYSDDPRTEFGLGALGSGGDVIRAIRELSYKGGNTRTG
AAILHVADHVFLPQLARPGVPKVCILITDGKSQDLVDTAAQRLKGQGVKLFAVGIKNADP
EELKRVASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTLPADDLTSGPRDLVL
SEAGSQSLRVQWTAASGPVTGYKVQYTPLTGLGQPLPSERREVSVPAGETSTQLQGLRPL
TEYQVTVVALYANSIGEAVSGTARTTALEGPELTIQNTTTHSLLVAWRSVPGATGYRVTW
RVLSGGVTQQQELGPGQGSVLLRDLEPGTDYEVTVSSLLGRSIGSASSLTARTDTSVEQT
LRPVILGPTSILVSWNLVPEARGYRLEWRRESGLGVPQKVVLPSDVTRYQLDGLQPGTEY
RLTLYTLLEGREVATPATVVPTGPELPVGPVTDLQATELPGQRVRVSWSPVPGATEYRIT
VRSAQGVERTLVLPGSQTAFDLDDVRAGLSYTVRVSARVGTREGGASILTVRRELEAPLA
IPGLRVVASDATRVRVAWGPVPGASGFRISWRTDGGPESSQTLPPESTATDILGLRPGTS
YQVAVSALRGREESPPVVIVAQTDPLGPVRTVHVTQTSSSSVTIAWNRVPGATGYRVSWH
SGHGPEKSQLVSGEATVAELDGLEPDTEYRVHVRAHVAGVDGTPASVVVRTDPAPVGSVS
KLQILNASSDVLRVTWVGVTGATAYRLAWGRSEGGPTRQQMLPGNTDSAEIRGLEGGVSY
SVRVTALVGDREGAPVSIVVTTPPEAPPALETLRVVQRGEHSLRLRWRPVPGARGFRLRW
RPEGGQEQSRVLGPDLSSYELDGLEPATLYRMWLSVLGPAGEGPPMEVTAYTESLRVPSS
ELRVVDTSVDSVTLAWTPVSGVSSYILSWRPLGRPGQDIPGASQTLPGISSSQQVTGLEP
GISYTFSLTPIREGVRGPEASLTQKPVCPRGLMDVVFLLHTTQDNAHRAEAAKRALERLV
SALGPLGPQAVQVGLLSYSHRPSPLFPLNSSYNPDVILQKIHSIPYVDPSGNNLGTAVVT
AHRHLLAPDAPGRRQHIPGIMVLLVDEPLRGDIFNPIREAQAAGLKVMILGQAGADPEQL
RRLVPGMDPVQTFFAVDDGSSLDRAVSGLATSLCQIGSTIQPQPEPCTVHCPKGQKGEPG
EMGLKGQAGPPGPPGLPGRIGVPGPQGPPGGTVAKGERGFPGADGPPGSPGRPGTPGTPG
SMGSPGWPGPRGETGERGPRGPKGEPGEPGRVIGGGGPGLPGQKGDPGLPGLPGSRGPLG
DPGPRGPPGLPGTAVKGDKGDRGERGPPGPGDGSTAPGEPGLPGLPGSPGPQGPVGPSGE
KGEKGDCEDGAPGLPGQPGSPGEQGLRGPSGDIGPKGDRGPKGAVGDTGEKGERGSPGPV
GPQGLPGVAGRPGAEGPEGPPGPVGRRGEKGEPGRPGDPAVGPDGTGAKGEKGDVGPTGP
RGAAGVKGERGPPGLVLPGDPGPKGDPGDRGPIGLSGRAGPPGDSGPPGEKGDPGRPGSP
GPIGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRN
GSPGPSGPKGDRGEPGPPGLPGRLVDSGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGE
RGVSGLRGPPGPQGDPGVRGPTGEKGDRGPPGLDGRSGLDGKPGAPGPPGPHGATGKAGD
PGRDGLPGLRGEHGPPGPPGPPGIQGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGA
PGREGHDGPKGERGAPGSPGLQGPPGLPGQMGPSGQGFPGVPGNTGPKGDRGDTGPKGEQ
GLPGERGLRGDPGSVGNVERLLETIGIKTSALREIVETWDESSGSFLPMPERRRGPKGDP
GERGPPGKEGPIGFSGERGLKGERGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGL
PGRAGGAGEAGRPGERGERGEKGERGEQGRDGPPGLPGPPGPPGPKVAVDEPGPGLSGVQ
GPPGFKGAKGEPGSDGDQGPKGDRGMPGIKGDRGEPGQKGLDGSPGLPGERGVAGPEGKP
GLQGPRGTPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVG
LPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGVPGSPGLPGPVG
PKGEPGQTGTPGQAVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRA
GEPGDPGEDGQKGAPGLKGNKGDPGVGVEGPPGPAGLPGVKGDVGPPGSPGAPGVVGFPG
QTGPRGEMGQPGPSGERGLAGLPGREGPPGPLGPPGPPGSTGVPGASGPKGDKGDSGVGL
PGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDAGTSGLKGDKGDAALAMG
APGPRGAKGDMGERGLPGIDGDKGPRGDTGNPGEKGTKGEPGDKGSAGLLGARGLTGPKG
EPGAAGIPGDPGSPGKDGTPGVRGDKGDTGFMGPRGLKGERGVKGACGLDGEKGDKGEGG
PPGRPGLAGRKGDMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGSKGDQGEKGERGPPG
IGGFPGPRGNDGSSGPPGPPGSVGPKGPEGLQGQKGERGPPGERMVGAPGAPGTPGERGE
QGRPGPAGPRGEKGEAALTEDDIRAFVRQEMSQHCACQGQFIASGSRPLPSYAADTAGPQ
LPPVPVLRVSHAEEEGQVPPEDDEYEYSEYSVEEYQDPEAPQDGNDPCLLPLDEGSCTAY
TLRWYHRAVASGTEACHPFVYGGCGGNANRFGTREACEHRCRPHMVQNQGTGAARS
NT seq
8811 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgccgctcctggtggccgcgctctgcgccgggatcctggcaggggcgctccga
gtgcgggcccagcagagggagagagtgacctgcacacgcctttatgctgctgacatcgtg
ttcctacttgatggctcttcatccatcggccgtggcaacttccgtgaagtgcgaggtttc
ctggagggattggtgtggcccttctctggggcggccagtgcacagggtgtgcgcttcgct
gccgtgcagtacagtgatgatccacggacagagtttggcctcggtgcacttggctcaggg
ggtgatgtgatccgagccattcgtgagctcagctacaagggtggcaacacgcgcacaggg
gctgcaattctccatgtggccgaccatgtcttcctgcctcagctggcccgcccaggggtc
cccaaggtctgcatcctcatcacagatgggaagtcccaggacctggtggacacagctgcc
cagcggctcaaggggcagggcgtcaagctgtttgctgtgggaatcaagaatgctgacccc
gaggagctgaagcgagtcgcctcacagcccaccagtgatttcttcttctttgtcaacgac
ttcagtatcctgaggacactgttgccccttgtttcccggagagtgtgtaccacagctggt
ggtgtgcctgtgaccctgcctgctgatgacttgacctctggtccacgagacctggtgctg
tctgaagcaggcagtcaatccttgagagtacagtggacagcggccagtggcccagtgacc
ggctacaaggtccagtacactcctctgacagggctgggacagccactgccaagcgagcgg
cgggaggtgagcgtcccagcaggtgagaccagcacacagcttcagggtctccggccactg
actgagtaccaagtgactgtggtagccctctacgccaatagcatcggggaggctgtgagc
gggacagctcggaccactgccctggaggggccggaactgaccatccagaatactacaacc
cacagcctcctggtggcttggcggagtgtaccaggtgccactggctaccgtgtgacatgg
cgggtcctcagtggcggtgtcacacagcagcaggagctgggccctgggcaggggtcagtg
ctgctacgtgacctggagcctggcacagactacgaggtgactgtgagcagcctgcttggc
cggagcatcgggtctgcttcctccctgactgcccgcactgacacttctgttgaacagacc
ctgcgcccggtcatcctgggccccacatccattctcgtttcctggaacttggtgcctgag
gcccgtggctaccggctggaatggcggcgtgagagtggcttgggggtgccacagaaggtg
gtgctgccctctgacgtgacccgctaccagctggatgggctgcaaccgggcactgagtac
cgcctcacgctctacaccctgctggagggccgcgaggtggccacacctgcaactgtggtc
cccactgggccagagctgcccgtgggccctgtgacagacctgcaggcaaccgagctgcct
gggcagcgagtgcgagtgtcctggagcccagttcccggggccaccgagtaccgcatcact
gtgcgaagcgcccagggggttgaaaggaccctggtgcttcctggaagtcagacagccttt
gacttggatgatgtccgggccggactaagctacactgtgcgggtgtctgctcgagtgggt
acccgcgagggtggcgctagcatcctcactgtccggcgggaactggaagccccacttgct
atcccagggctacgagtggtggcctcagatgcaacacgggtgagggtggcctggggacct
gttcctggagccagtggatttcggattagctggaggacagatggtggtccggagtccagc
cagacattgcccccagaatccacggccacagatatcctggggctaaggcctggaacctcc
taccaggtggctgtgtcagcactgcgagggagagaggagagtccccctgtggtcatcgtg
gctcaaaccgacccactgggcccagtaaggactgtccatgtgacgcagaccagcagctca
tctgtcaccatcgcctggaacagggttcctggtgccacaggatacagggtttcctggcat
tcaggacatggcccagaaaaatcccagttggtttctggagaggccacagtggctgagctg
gatgggctagagccagatactgagtacagggtgcatgtgcgggcccatgtagctggtgtg
gatgggacccccgcctctgtggttgtgaggacagaccctgcgcccgtgggcagtgtttcg
aagctgcagatcctcaatgcttccagtgacgttctgcgggtcacctgggtgggggtcact
ggagccacagcctacagactggcctggggccgcagcgagggtggccccacgagacagcag
atgctccccggaaacacagactcggcagaaatacggggtctggaaggaggagtcagctac
tctgtgcgagtgactgcacttgtcggggaccgggagggcgcgccggtctccatcgtcgtc
accacgccgcctgaggctccgccagccctggagactcttcgcgtagtgcagcgaggggag
cactcgctgaggctgcgctggcggccggtgccaggggcgcggggcttccgtctgcggtgg
cgacccgagggtggccaggagcagtcccgggtcctggggcctgatctcagcagctatgaa
ctggatgggctagaaccagcaaccctataccgcatgtggctgagcgttttggggccggct
ggagaagggccccccatggaagtgactgcatacactgagtcactccgtgtcccaagttct
gaactgcgtgtggtggacacttcagttgactcagtgactctggcttggaccccagtgtct
ggagtatccagctacatcctgtcctggcggccacttggacgccctggccaagacatccct
ggggcctcacagacacttccagggatctcgagctcccagcaggtgacagggctagagcct
ggcatctcttataccttctctctgacacccatccgggagggtgtacggggtcctgaggcc
tctctcacacagaaaccagtgtgtccccgtggcctgatggatgtggtgttcctgctgcac
accactcaggacaatgctcatcgtgcagaggctgcaaagcgagccctggagcgtctggtg
tctgcacttgggcctcttgggccacaggcagtccaggttggcctcctatcctacagtcat
cggccctccccactgttcccgctgaatagctcctacaatcctgatgtcatcctgcagaag
atccacagcatcccctatgtggacccaagtgggaacaacctgggcactgcagtggttact
gctcacagacacctattagcaccggatgctcctgggcgccgccagcacataccagggata
atggttttgctagtagatgagcccttgagaggtgacatcttcaaccctatccgtgaggcc
caggctgctgggctcaaagtgatgatattgggccaggccggagctgacccagaacagttg
cgtcgcttggtgccaggcatggatcctgtccagactttctttgctgtggatgatggttca
agcttggaccgggcagtcagtggcttggcaacatccctgtgtcagattggctccaccatt
cagccacagccagagccatgcacagtgcattgtccaaagggccagaagggggaacctgga
gagatgggcctgaaaggacaagcagggcctcctggcccccccggcctcccgggcaggatt
ggtgttcctggcccccaggggccccctggtggtaccgttgcaaagggtgagaggggcttc
cctggggcagatgggcctccaggcagccctggccgccctgggactcctggaacccctggc
tccatgggctccccagggtggcctggtcctcgtggagaaacaggagaacgaggacctcga
ggcccgaagggggagccgggagagcctggacgagtcattggaggcggtggcccagggctt
cctgggcagaaaggggaccctggacttccaggcctccctggatcccgtggcccattgggg
gacccaggaccccgtggtcccccaggactccctggaacagctgtgaagggtgataaaggt
gatcgtggggagcggggccccccaggaccaggtgatggcagcactgctccaggggagcct
gggctgccgggtcttcctggaagccctggaccccaaggcccagttggcccctcgggagag
aaaggagaaaagggtgactgtgaggatggagccccaggcctcccaggacaacctggtagc
ccgggtgagcagggcctacgaggaccttctggagacattggccccaaaggtgatagagga
cccaaaggggctgtgggtgacactggagagaagggtgaacgtggatcccctggcccagtg
ggaccccaggggctgcctggagtggctggacgtcctggagccgaggggcctgaagggcca
ccgggacctgttggccgccgaggagagaagggggaacctggtcggcccggggaccctgca
gtgggacctgatgggaccggggcaaaaggagagaagggagatgtggggcccactgggccc
agaggagctgcgggagtcaaaggggagaggggtccacctggcttggttcttcctggagac
cctggccccaagggagaccctggagaccggggtcccattggcctctccggtagagcagga
cccccaggtgactcagggcctcctggagagaagggagaccctgggcggcctggctcccca
ggacctatcggaccccgaggacgagacggtgaagttggagagaaaggtgacgagggcccc
ccgggtgacccaggtttgcctggaaaagctggcgagcgcggccttcggggtgcgcctgga
gctcggggcccagtgggtgagaagggagaccaaggagatcctggagaggatggacgaaat
ggcagccctggaccatctggacccaagggtgaccgtggggagccaggtccccctggactc
cctggacggctggtggactcaggacttggagctggagagaagggagagcctggggaccgt
ggacaggagggtcctcgaggacccaagggtgacccaggcccccctggagcctctggggag
aggggtgtcagtggacttcgggggcccccagggcctcagggggacccaggtgtccgaggc
ccaacaggagagaagggtgaccgaggtccacctggcctggatggccgtagtgggctagat
gggaaaccaggagcccctggcccccctggaccgcatggtgctacaggcaaagctggagac
ccagggagagatgggcttccgggcctccgaggagaacatggcccccctggcccccctggc
ccccctggaatccagggaaagccaggagaagacggcaagcctggcctgaatgggaaaaat
ggagaacctggggaccctggagaagatggaaggaagggagagaagggagattcaggtgcc
cctgggagagaaggtcacgatggtcccaagggtgaacgtggagctcctggtagccctgga
ctccagggccccccaggcctcccagggcagatgggcccttctggccagggttttcctggg
gttccgggaaacacaggccctaagggtgaccgtggggacaccggacccaaaggggaacag
ggcctccctggagagcgtggcctgagaggagatcctggaagtgtggggaatgtggagcgg
ttgctggaaactattggcatcaagacgtctgccctgcgggagattgtggagacctgggat
gagagctctggcagcttcctgcccatgccagaacgacgccgtggccctaagggggaccca
ggcgagcggggccccccaggcaaggagggccccattggcttttctggagaacgtgggctg
aagggagagcgtggagatccaggcccacaggggccaccaggcctggcccttggagaaagg
ggcccccctggacctcctggccttgcaggggagcctggaaagcctggcattcctgggctc
ccaggccgggctgggggcgcgggggaggcaggaagaccaggagagaggggagaacgggga
gagaaaggagaacgcggggaacagggcagagatggccctcctggcctccctggacctcct
ggcccccctggccccaaggtggctgtggatgagccaggtcctggactctctggagttcaa
ggacctcctggattcaagggcgcaaagggggagccaggcagtgacggcgaccaaggcccc
aagggagacaggggtatgccaggaatcaagggagaccggggagagcctggacagaagggg
ctcgatggcagcccgggtctaccaggagagcgtggtgtggctggacctgaagggaagcca
ggtttgcaaggtccgagggggacccctggcccagtgggtggccatggagaccctggaccc
cccggtgccccgggtcttgctggccccgcaggaccccagggtccttctggcctgaagggg
gagcctggagagacaggaccaccaggacggggcctgcctggacccactggagctgtggga
cttcccggtcctcctggcccttcaggcctggtgggtcctcagggggcgccaggtttgcct
ggacaagtgggagagacaggaaagccaggagccccaggtcgtgatggtgctggtggaaaa
gatggagacagaggagctcctggtgtgccggggtcacctggcctgcctggccctgttgga
cctaaaggagagcctggacaaacggggactcccggacaggctgtggtcgggccccctgga
gcaaagggagagaagggagcccctggaggccttgctggagacctggtgggagagccggga
gccaaaggtgaccgaggactgccagggcctcggggtgagaagggtgaagctggccgtgca
ggggagcctggagaccctggggaggatggtcagaagggggctcctggactcaagggtaat
aagggggacccgggagtcggggttgagggaccccccgggccagctggtcttccgggtgtg
aagggagatgtgggcccccctggatcccccggggctcctggtgttgttggattccctggt
cagacaggccctcgaggagagatgggtcagccaggccccagtggagagcggggtctggcc
ggtctcccagggagagagggacccccaggtcccttgggaccacctggaccaccagggtca
acgggagtgcccggggcctctggacccaaaggagacaagggagactctggagtggggctg
ccaggggcccggggtgagcgtggggagccaggagtccggggtgaagatggccgtcccggc
caggagggaccccgaggactcacgggacccccaggaagccggggggaacgtggggagaaa
ggtgatgctgggacctcagggctaaagggtgacaagggtgacgcagccttagccatgggg
gctccagggccacggggtgccaagggggacatgggtgaacgagggcttccaggcatagat
ggtgacaaaggacctcgcggagacactgggaaccctggagagaagggcaccaaaggagag
cctggtgacaagggttcagccgggttgctgggagctcgtggactcactggacccaagggt
gagcctggtgccgcagggatcccaggagacccgggatccccaggaaaggatggaacccct
ggtgtccgaggagacaaaggagatactggcttcatgggccccaggggcctcaagggtgaa
cgaggggtaaagggggcctgtggcctcgatggagagaagggagataagggagaaggtggt
cccccaggccgccctgggctggcaggacgcaagggagatatgggggagccaggtgtgccg
ggccagtcgggggcccctgggaaggagggcctgattggtcccaagggtgatcgaggcttt
gatgggcagccaggatccaagggtgaccagggagagaaaggggagcgggggcccccagga
attgggggcttcccaggtcctaggggcaatgatggctctagtggtcctcctgggccacct
ggcagtgtcggtcccaaaggcccagaaggacttcagggccagaagggtgagcgaggtccc
cctggagagagaatggtgggtgctcctggagcccctgggacccctggagagagaggagag
caggggcggccagggcccgctggcccccgtggagagaagggagaagctgcgttaacagag
gatgacattcgagcctttgtgcgccaggagatgagtcaacattgcgcctgccagggccag
tttattgcctctggatcacgacccctccctagctatgctgcagacactgccggcccccag
ctcccccctgtgcctgtgctccgggtttctcatgcagaggaggaaggccaggtaccccct
gaggatgatgagtatgaatactctgagtactccgtggaggaataccaggaccctgaagct
cctcaggatggcaatgacccttgcttgcttccactggacgagggctcctgtactgcctac
actctgcgctggtaccatcgggctgtggcaagtggcacagaggcctgtcatccctttgtc
tatggtggctgtggagggaatgccaatcgttttgggacccgggaggcctgtgagcaccgg
tgccggccccacatggtccagaaccagggaacaggtgctgcccggagctga
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integrated database retrieval system
