KEGG   Canis lupus familiaris (dog): 403728
Entry
403728            CDS       T01007                                 
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
  KO
K06099  cold shock domain protein A
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    403728 (YBX3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cfa03000]
    403728 (YBX3)
   03041 Spliceosome [BR:cfa03041]
    403728 (YBX3)
Transcription factors [BR:cfa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, DbpA-like
    403728 (YBX3)
Spliceosome [BR:cfa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    403728 (YBX3)
SSDB
Motif
Pfam: CSD OB_RNB Herpes_LMP1 S1CSD-TOTE-2
Other DBs
NCBI-GeneID: 403728
NCBI-ProteinID: NP_001003127
Ensembl: ENSCAFG00000013401
VGNC: 48480
UniProt: Q9N1Q3
LinkDB
Position
27:complement(11465924..11493283)
AA seq 304 aa
MSEAGEATGTTSSSSSSLPQAPAEAAPAAPQDPAPKSPGGSGAPQAAAPPPAALAAGNPG
GDAAPAATGTAAPASSAPAGGEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFV
HHTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYR
RGYYGRRRGPPRNAGEIGEMKEGVPEGTQLQGPVHRNPTYRPRYRRGPPRPRPAPAVGEA
EDKENQQAANGPNQPSARRGYRRPYNYRRRPRPPNAPSQDGKETKAPEVPSENPAPATEQ
SSAE
NT seq 915 nt   +upstreamnt  +downstreamnt
atgagcgaggcgggcgaggccaccggcaccaccagcagcagcagcagcagcctcccgcag
gctccggcggaggcggcccccgcggcgccccaggaccccgcgcccaagagcccggggggc
agcggcgcgccccaggccgcggccccgccgcccgccgcgctcgccgcgggaaaccccggt
ggggacgcggcccccgcagccacgggcaccgcggcccccgcctcttcggcccccgccggc
ggtgaggacgcggagaagaaagttctcgccaccaaagtccttggcactgtcaaatggttc
aacgtcagaaatggatatggatttataaatcgaaatgacaccaaagaagatgtatttgta
catcacactgccatcaagaagaataacccacggaaatacctgcgcagtgtaggagatgga
gaaactgtagaatttgatgtggttgaaggagagaagggtgcagaagcagccaatgtgact
ggaccagacggagttcctgtagaagggagccgttacgctgctgatcggcgtcgatacaga
cgtggttactatggcagacgccgtggacctccccgtaatgccggtgagattggagagatg
aaggagggagtcccagaggggacacagctgcagggaccggttcatcgaaatccaacttac
cgcccaaggtaccggagaggccctcctcgcccccgacctgccccagctgttggtgaggct
gaagataaagagaaccaacaagcagccaatggtccaaaccagccatctgctcgccgtgga
taccggcgcccatacaactatcggcgtcgcccccgcccccctaatgctccttcacaagat
ggcaaagagaccaaggcacctgaagttccatctgagaaccccgctccagccaccgagcag
agcagtgctgagtaa

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