Canis lupus familiaris (dog): 403824
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Entry
403824 CDS
T01007
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain precursor
KO
K06236
collagen type I alpha
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04151
PI3K-Akt signaling pathway
cfa04510
Focal adhesion
cfa04512
ECM-receptor interaction
cfa04611
Platelet activation
cfa04820
Cytoskeleton in muscle cells
cfa04926
Relaxin signaling pathway
cfa04933
AGE-RAGE signaling pathway in diabetic complications
cfa04974
Protein digestion and absorption
cfa05146
Amoebiasis
cfa05165
Human papillomavirus infection
cfa05205
Proteoglycans in cancer
cfa05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
403824 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
403824 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
403824 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
403824 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
403824 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
403824 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
403824 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
403824 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
403824 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
403824 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
403824 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
403824 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cfa00536
]
403824 (COL1A2)
Glycosaminoglycan binding proteins [BR:
cfa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
403824 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
403824
NCBI-ProteinID:
NP_001003187
Ensembl:
ENSCAFG00000002069
VGNC:
39465
UniProt:
O46392
LinkDB
All DBs
Position
14:19443112..19478898
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AA seq
1366 aa
AA seq
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MLSFVDTRTLLLLAVTSCLATCQSLQEATARKGPTGDRGPRGERGPPGPPGRDGDDGIPG
PPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPRGPPGASGAPGPQGFQGPAGEP
GEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIR
GHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSV
GPVGPAGPIGSAGPPGFPGAPGPKGEIGPVGNPGPAGPAGPRGEVGLPGVSGPVGPPGNP
GANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGIVGEPGPAGSKGESGNK
GEPGSAGAQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGPAGVMGPP
GPRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPI
GPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQ
GGKGEQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAA
GPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGASGPGGLPGERGAAGIPGGKGEKGET
GLRGEIGNPGRDGARGAPGAMGAPGPAGATGDRGEAGPAGPAGPAGPRGTPGERGEVGPA
GPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPIGSAGPSGPNGPPGPAGSRGDG
GPPGATGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGASGPP
GFTGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGSVGEPGPLGIA
GPPGARGPPGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQAGHKGERGYPGNIGPVGAV
GAPGPHGPVGPTGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGEKGPRGLP
GLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGQPGTVGPAGIR
GSQGSQGPAGPPGPPGPPGPPGPSGGGYDFGYEGDFYRADQPRSPPSLRPKDYEVDATLK
SLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTG
ETCIRAQPENIPAKNWYRNSKVKKHIWLGETINGGTQFEYNVEGVTTKEMATQLAFMRLL
ANHASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKK
TNEWRKTIIEYKTNKPSRLPILDIAPLDIGDADQEFRVDVGPVCFK
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacttcgtgcctagca
acatgccaatctttacaggaggcaactgcaagaaagggcccaactggagatagaggacca
cgtggagaaaggggtccaccaggaccaccaggcagagatggtgacgatggtatcccaggc
cctcctggtccacctggtcctcctggcccccctggtcttggcgggaactttgcagcccag
tatgatggaaaaggagttggccttggccctggaccaatgggtttgatgggacctagaggt
ccacctggtgcatctggcgctcctggccctcaaggtttccaaggacctgctggtgagcct
ggtgaacctggtcaaactggtccagcgggtgctcgtggtccacctgggcctcctggcaag
gctggtgaggatggtcaccctggaaaacctggacgacccggtgagagaggagttgttgga
ccacagggtgctcgtggtttccctgggactcctggacttcctggtttcaagggcattagg
ggacacaatggtctggatggattgaagggacagcccggtgctccaggcgtgaagggtgaa
cctggtgcccctggtgaaaatggaacgccaggtcaaacaggagcccgtgggcttcctggt
gagagaggacgtgttggtgcccctggtccagctggtgcccgtggaagtgatggaagtgtg
ggtcctgtgggtcctgctggtcctatcgggtctgctggccctccaggcttcccaggtgct
cctggccccaagggtgaaatcggacctgttggtaaccccggtcctgctggtcccgcgggt
ccccgtggtgaagtgggtcttccaggtgtttccggccccgttggaccccctggtaaccct
ggagccaacggcctgactggtgctaagggtgctgctggcctgcccggtgtcgctggggct
cctggcctccctggaccccgtgggattcctggtcctgttggtgccgctggtgctactggt
gccagaggaattgttggtgagcctgggccagctggttccaaaggagaaagtggcaacaag
ggtgagcctggctctgctggtgcccaaggtcctcctggtcccagtggtgaagaaggaaag
agaggccccaatggtgaagctggatctgctgggccctctggacctcctgggctgagagga
agtcctggttctcgtggtcttcctggagctgatggcccagctggtgtcatgggtcctccc
ggccctcggggtgccaccggccctgctggtgtccgcggtcccaatggagattctggtcgc
cctggagagcctggcctcatgggaccccgaggttttcctggtgcccctggtaatgttggc
ccagctggtaaagaaggtcccatgggtctccctggtattgatggcaggcctggaccaatt
ggcccagcgggagcaagaggagagcccggcaacatcggattccctggacccaaaggcccc
actggtgatcctggcaaaaatggtgataaaggtcatgctggtcttgctggtgctcggggt
gctccaggtcctgatggaaacaatggtgctcagggacctcctggaccacaaggtgtccaa
ggtggaaaaggtgaacagggtcctgctggtcctccaggcttccagggtctgcctggcccc
gcaggtacagctggtgaagttggcaaaccaggagaaaggggtctccctggtgaatttggt
cttcctggtcctgctggtccaagaggggagcgtggtccccctggagaaagtggtgctgct
ggtccttctggtcctattggaagccgaggtccttctggaccccctgggcccgatggaaac
aagggtgaacctggcgtgcttggcgccccgggcaccgctggcgcgtccggtcccggtgga
ctcccaggagagaggggtgctgccggcattcctggaggcaagggagaaaagggtgaaacc
ggtctcagaggcgaaattggtaacccaggcagagatggcgcccgtggagctcctggtgcc
atgggtgcccctggtcctgccggagccactggtgaccggggtgaagctggtcctgccggt
cccgctggccctgctggtcctcgtggtacccctggtgaacgtggtgaggttggtcccgct
ggccccaatggatttgctggtcctgctggtgctgctggtcaacctggtgctaagggagag
agaggaaccaaagggcccaagggtgaaaatggccccgttggtcccacaggccccattgga
tctgccggcccatctggtccaaatggtccccctggtcctgctggaagtcgtggtgatggt
ggcccccctggtgctactggtttccctggtgctgctgggcggactggtcctcctggaccc
tctggtatcactggccctcctggtccccctggtgctgctggtaaagaaggactccgtggg
cctcgaggtgaccaaggtccagttggccgaacgggagaaacaggtgcctctggtccccct
ggctttactggtgagaagggtccctctggagagcctggtaccgctggacctcctggcaca
ccaggtcctcaaggtctccttggtgctcctggcattctgggtctcccaggctctcggggt
gagcgtggtctaccaggtgttgctggatccgtgggtgaacccggacctcttggcattgct
ggtccacctggggctcgtggtcctcctggagctgtgggtgcgcctggagtcaacggtgct
cctggtgaagctggtcgtgatggcaaccctgggaatgatggtcccccaggccgcgatggt
caagccggacacaagggagagcgtggttaccctggcaacattggtcccgttggcgctgtg
ggtgcacctggtcctcatggccctgtgggtcccactggcaaacacggaaaccgtggtgaa
cctggtcctgctggttctgttggtcccgtcggcgctgttggtccaagaggtcctagtggc
ccacaaggtattcgaggtgataagggagagcctggtgagaaggggcccagaggtcttcct
ggcttaaagggacacaatggactgcaaggtcttcctggtcttgctggtcaacatggcgat
caaggtgcacctggttctgtgggtcctgctggtcctaggggtcctgctggtccttctggc
cctgctggcaaagatggtcgcactgggcaacctggtacagtcggacctgctggcattcgt
ggctctcagggtagccaaggtcctgctggccctcctggtccccctggccctcctggccct
cctggcccaagtggtggtggctatgactttggttatgaaggggacttctacagggctgac
cagcctcgctcaccaccttctctcagacccaaggactatgaagttgatgctactctgaaa
tccctcaacaaccagattgagacccttcttactcctgaaggctctaggaagaacccagct
cgcacatgccgagacctgagactcagccacccagagtggagcagtggttactactggatt
gaccctaaccaaggatgcactatggatgctatcaaagtatactgtgatttctctactggc
gaaacctgcattcgggctcaacctgaaaacatcccagccaagaactggtacagaaactcc
aaggtcaagaagcacatctggttaggagaaactatcaatggtggtacccagtttgaatat
aatgttgaaggagtaaccaccaaggaaatggctactcaactcgccttcatgcgcctgctg
gccaaccatgcctctcaaaacatcacctaccactgcaagaacagcattgcctatatggat
gaggagactggcaacctgaaaaaggctgtcattctgcaaggttccaatgatgttgaactg
gttgccgagggcaacagcaggttcacctacactgttcttgtagacggctgctctaaaaag
acaaatgaatggagaaagacaatcattgaatacaaaacaaataagccatcccgcctgcct
atccttgatattgcacctttggacatcggtgatgctgaccaagaattcagggtggacgtt
ggcccagtctgtttcaaataa
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