Canis lupus familiaris (dog): 403843
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Entry
403843 CDS
T01007
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04151
PI3K-Akt signaling pathway
cfa04382
Cornified envelope formation
cfa04510
Focal adhesion
cfa04512
ECM-receptor interaction
cfa04820
Cytoskeleton in muscle cells
cfa04926
Relaxin signaling pathway
cfa04933
AGE-RAGE signaling pathway in diabetic complications
cfa04974
Protein digestion and absorption
cfa05146
Amoebiasis
cfa05165
Human papillomavirus infection
cfa05200
Pathways in cancer
cfa05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
403843 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
403843 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
403843 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
403843 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
403843 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
403843 (COL4A2)
09158 Development and regeneration
04382 Cornified envelope formation
403843 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
403843 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
403843 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
403843 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
403843 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
403843 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfa04147
]
403843 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
cfa00536
]
403843 (COL4A2)
Exosome [BR:
cfa04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
403843 (COL4A2)
Glycosaminoglycan binding proteins [BR:
cfa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
403843 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
403843
NCBI-ProteinID:
XP_038312823
VGNC:
39474
LinkDB
All DBs
Position
22:58360350..58530121
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AA seq
1712 aa
AA seq
DB search
MDRPRCSAHSPALRRWLLLGAVTVGLLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGSPGITGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGPPGYDGCNGTRGDVGRQGPEGPAGFLGPPGPQGPKGQKGEPYALSSVDRD
KYRGEPGEPGLVGFQGPPGRPGPIGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKG
EKGDMGLPGPNGIPSDTHHAIIGPMKEMFHPDQYKGEKGSEGEPGRKGISLKGEEGIMGF
SGTRGAPGYDGEKGSPGQKGSRGLDGYQGPDGPPGPKGEAGDRGPPGAPAYFPHPSQVKG
ARGDPGFPGTHGDPGSRGEPGDPGPPGLPGPSIRDEDGKRGLPGEMGPKGFIGDPGIPAP
YPGPPGTDGKPGLRGPPGAAGPPGPDGFLFGLKGTEGSAGFPGPSGFPGARGQKGWKGDA
GDCKCAEGDQFVGGLPGLPGPKGFPGINGEPGRKGSQGDPGQHGIPGFPGFKGAPGTVGP
PGPKGLKGDSRAITTKGERGQPGVPGVPGLKGDDGVPGRDGLDGFPGLPGPPGDGIKGPP
GDSGYPGAPGTKGTPGERGPPGLGLPGPKGERGFPGDAGLPGPPGFPGPPGPPGTPGQID
CDTGVKRPIGGDGQEAVQPDCVRGPMGSPGLPGPPGPTGAKGLQGIPGLSGADGTPGLRG
LPGDPGREGFPGPPGFVGPRGSKGAVGLPGPDGHPGPTGLPGPVGPPGDRGLPGEVLGAQ
PGPRGDAGLPGHPGLKGPPGERGPPGFRGSQGMPGMPGLKGQPGFPGPSGQPGLPGPPGQ
HGFPGAPGREGPLGLPGASGRGGLPGDRGDPGDTGVPGPVGMKGLSGDRGDPGLLGERGP
PGSPGFKGMSGMPGIPGQKGGRGSPGMDGFQGMVGLKGRPGLPGNKGEAGFFGIPGLKGL
AGEPGVKGSRGDPGPPGPPPIIQPGMKDIKGEKGDEGPMGLKGYLGLKGLPGMPGIPGLS
GVPGLPGKPGHIKGIKGDIGIPGVPGLPGFPGVPGPPGIIGFPGFTGSRGDKGAPGRAGL
YGEVGPTGDFGDSGDIINLPGSPGLKGERGIAGAPGLKGFFGEKGTEGEVGFPGITGVPG
VQGPPGPKGQTGFPGLTGLQGPQGDPGRAGVPGNKGDYGWPGIPGSPGFPGIRGISGLHG
LPGTKGLPGSPGADIHGDPGFPGPAGDRGDPGEANIRPGPIGAPGQKGERGDPGGRGPIG
SPGLQGFPGITPPSNMSGLPGDKGAPGIFGLEGYRGPPGPPGPAALPGSKGDEGNPGAPG
TPGTKGWGGDPGPQGRPGVFGLPGEKGPRGEPGFMGNTGATGSVGDRGPKGPKGDRGLPG
APGSVGSPGIAGIPQKITIQPGPVGPQGRRGPPGMQGEMGPQGPPGDPGFRGAPGKAGPQ
GRGGVSAVPGFRGDQGPMGHQGPVGQEGEPGRPGTPGLPGMPGRSVSIGYLLVKHSQTDQ
EPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASR
NDKSYWLSTTAPLPMMPVAEDDIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLW
IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIP
EQSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaccccggtgctcggcgcacagccctgccctgcggcggtggctgctgctgggg
gctgtgacagtggggctcctggcccagagcgtcctggcgggcgtgaagaagtttgacgtg
ccctgtggaggcagagactgcagtggaggctgccagtgctaccccgagaagggaggaagg
ggccaaccagggccagtgggcccccagggatacactgggcctccgggcctgcagggattc
ccaggactgcagggccgcaaaggtgacaagggtgaaagagggtcacccgggatcacagga
ccgaaaggagacgtgggagcgagaggtgtttctggattcccaggtgccgacggcattccc
ggacaccctgggcaaggtgggcccagaggaccacctggctacgacggctgcaatgggacc
agaggagacgtgggccggcagggacccgagggtcctgcgggcttcctcggccctcctggg
ccccaaggacccaaagggcagaaaggcgagccatatgcactatccagtgtggaccgggac
aaatacaggggtgaacctggagagcctggattggttggtttccagggtcctcctggccgc
cctgggcctataggacagatgggtccagttggagctccaggaagaccaggcccgcctgga
ccccccggaccaaaaggacagccaggcaacagaggacttggcttttatggagagaaagga
gaaaaaggcgacatggggctgccaggacccaatgggattccatcagacacccaccatgcc
atcataggacccatgaaggaaatgttccacccagatcaatataagggcgaaaagggaagt
gagggggagccgggaagaaaaggcatctccttgaagggagaagaaggaatcatgggcttt
tctggcacacggggtgctcctggctacgatggtgaaaaagggtcaccgggacaaaaaggg
agcagaggactggatggctatcaaggccctgacggacccccaggacccaagggagaagca
ggtgaccgtgggcctccaggtgcccctgcatacttccctcatccctcccaagttaaaggt
gccagaggtgacccaggattcccagggacccacggggatccaggaagccgaggtgaacca
ggagacccgggcccaccaggtctccccggcccatccatcagagatgaagatggaaagaga
ggcttaccgggtgaaatgggccccaaagggttcataggagacccaggcatccctgcacca
taccccggcccaccaggcactgacggaaagccaggactccgaggacccccaggggctgct
ggaccacctggaccagatggtttccttttcggcttgaagggaacagaagggagcgcaggg
ttccctggaccttctggcttccctggagctcgcggacagaaaggatggaaaggtgacgct
ggggactgtaaatgcgcggaaggcgatcagttcgtcgggggtctcccagggctgccagga
cccaagggcttcccgggcatcaatggggagccagggaggaaagggagccaaggcgaccct
ggccagcacggcatccctgggttcccagggttcaagggcgcccctggcaccgttggacct
cccgggccgaaagggctgaagggggattctagagcaatcaccaccaaaggtgagagagga
cagccaggtgtcccaggtgtgcctgggctgaaaggtgatgatggtgtccccgggcgtgac
gggctggatggattcccaggcctcccaggccctcctggtgatggtatcaaaggccccccg
ggggactcgggttacccaggagcacccggtactaagggcactccaggagaaaggggcccc
cccggactgggcctgcctggccccaaaggcgagcgtggtttccccggagatgccggatta
cctggacccccaggctttcccggcccccccggacccccaggcactccaggacaaatagac
tgtgacacaggcgtgaaaaggcccatcggaggtgacggacaggaggctgtgcagccagat
tgtgtcagaggacccatgggatcgccaggcctgccaggacccccaggacccacaggtgcc
aagggcctccaaggaataccaggactgtcaggagctgacggaacaccggggctcaggggt
ctcccaggagacccaggtcgcgaaggattcccaggacccccagggttcgtggggccccga
ggatccaaaggtgcagtgggccttcctggcccagatggacacccaggtcccactggtctg
ccaggccctgttgggcccccaggggacaggggccttcctggagaagttctgggagcccag
cccgggccccgaggagatgctggactgcctggacaccccgggctgaagggccctcctgga
gagagaggtccacctggattcaggggaagccagggcatgccaggaatgccaggcctgaag
ggccagccaggcttcccaggaccctcgggccagccgggcctgcccgggccaccaggacag
catggcttcccaggagctcccggccgggaggggcccttggggctgccaggagcctcaggt
cgcggaggtctgcctggagacagaggggacccaggggacacaggtgtccccggccctgtg
ggcatgaagggtctgtctggcgacagaggtgaccccggtttgctgggtgaacgaggcccc
ccaggaagtcctggatttaaaggaatgagtggaatgcctggtatccctgggcagaaaggt
gggagaggctcgcccgggatggatggcttccaaggcatggtggggctcaaaggaagaccc
gggcttccaggaaataaaggagaggccggattttttggaattccaggactgaagggtctg
gctggtgagccgggtgtgaaaggcagccgcggggaccctgggcccccaggacctcctccc
atcatccagccaggaatgaaagacatcaaaggagagaaaggagacgaagggcccatgggg
ctgaaagggtacctgggcctgaaaggtcttcccgggatgccggggatccccgggctgtcc
ggagtgcctgggctgccggggaagccgggccacatcaaaggcatcaaaggagacatcggc
attcctggcgtgcccggtttaccaggatttcctggcgtgcccggcccccccggaatcatc
gggtttcctgggttcacaggaagtaggggtgacaagggagctccagggagagcaggcctt
tacggcgaggtgggccccacaggggactttggtgacagtggagacatcataaacctgcca
ggaagcccaggcctgaagggtgagcggggcatcgctggagcaccaggtctaaagggattc
ttcggggaaaagggaacggagggtgaagttggcttccctgggataacaggcgtgccaggt
gtccaaggccctcccggacctaaagggcaaacaggcttcccaggactgacagggctgcag
gggccgcagggagatccgggccgggcaggtgtgcctggcaacaaaggagactacggctgg
ccagggattccaggctccccaggctttcccggcatccgaggcatcagcggattacacggt
ttgccaggcaccaaaggccttcctggatccccaggtgcggacatccacggagaccctggc
ttccccggtcctgctggggacaggggcgaccccggagaggccaacatccgcccaggaccc
atcggggccccaggacagaaaggggagcgaggagatccagggggacgaggcccaattggg
agtccaggacttcaaggcttcccaggcatcacccccccttccaacatgtctgggttacct
ggtgacaaaggggcgccagggatatttggcctggaaggttatcgtgggcccccgggacca
cctgggcctgctgctcttcctggaagcaaaggagatgaggggaacccaggagctccagga
acccccgggactaaaggatggggcggggaccctgggccccagggccggcctggcgtgttc
ggtctccccggagaaaaagggcccagaggtgagcccggattcatgggcaacacaggagcc
accgggagtgtgggcgaccgaggccccaagggacccaagggagaccgaggactcccaggt
gcccctggctctgtgggatcccccgggatcgcaggaatcccccagaagattaccatccag
ccagggccagtaggtccacagggaaggagaggccctccggggatgcagggagagatggga
ccgcagggcccgccgggggatccaggtttccgtggggctccagggaaggcagggccccag
ggcagaggtggtgtgtctgctgttcccggattccgaggagaccaggggcctatgggacac
caggggccagtgggccaggaaggggagccgggccgcccagggacccccgggctgccgggc
atgcccggccgcagcgtcagcatcggctacctcctggtgaagcacagtcagacggatcag
gaacccatgtgccccgtgggcatgaacaagctctggagtggatacagcctgctgtacttc
gaaggccaggagaaagcccacaaccaggacctggggctggcgggctcctgcctggctcgg
ttcagcaccatgcccttcttgtactgcaaccctggtgatgtgtgctactatgccagccgc
aacgacaagtcctactggctgtccaccactgccccgctgcccatgatgccggtggccgag
gatgacatcaagccctacattagccgctgttccgtgtgcgaggccccagccgtcgccatt
gcagtccacagtcaagatgtctccatcccccactgcccagctggatggcggagtctctgg
attggatattccttcctcatgcacacagcagccggcgatgaaggtggtggccagtcgctg
gtgtcgccgggcagctgtctggaggacttccgtgccacgcccttcatcgagtgcaatgga
ggccgtggcacttgccactactacgccaacaagtacagcttttggctcaccaccatcccc
gagcagagcttccagggctcgccctccgccgacaccctcaaggcggggctcatccggacg
cacatcagccgctgccaggtgtgcatgaagaacctgtga
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