Canis lupus familiaris (dog): 403982
Help
Entry
403982 CDS
T01007
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 precursor
KO
K06527
vascular cell adhesion molecule 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04064
NF-kappa B signaling pathway
cfa04514
Cell adhesion molecules
cfa04668
TNF signaling pathway
cfa04670
Leukocyte transendothelial migration
cfa04933
AGE-RAGE signaling pathway in diabetic complications
cfa05143
African trypanosomiasis
cfa05144
Malaria
cfa05417
Lipid and atherosclerosis
cfa05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
403982 (VCAM1)
04668 TNF signaling pathway
403982 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
403982 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
403982 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
403982 (VCAM1)
05143 African trypanosomiasis
403982 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
403982 (VCAM1)
05418 Fluid shear stress and atherosclerosis
403982 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
403982 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cfa04515
]
403982 (VCAM1)
04090 CD molecules [BR:
cfa04090
]
403982 (VCAM1)
04091 Lectins [BR:
cfa04091
]
403982 (VCAM1)
Cell adhesion molecules [BR:
cfa04515
]
Immunoglobulin superfamily
VCAM
403982 (VCAM1)
CD molecules [BR:
cfa04090
]
Proteins
403982 (VCAM1)
Lectins [BR:
cfa04091
]
I-type lectins (Siglecs)
403982 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
C2-set
ig
Ig_2
V-set
C2-set_2
Ig_4
ICAM_N
Ig_5
ICAM1_3_5_D2
C1-set
Ig_6
C2-set_3
Adhes-Ig_like
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
403982
NCBI-ProteinID:
NP_001003298
Ensembl:
ENSCAFG00000020004
VGNC:
48240
UniProt:
Q28260
LinkDB
All DBs
Position
6:complement(52013558..52031171)
Genome browser
AA seq
739 aa
AA seq
DB search
MPRKMVVIFGASNILWMVFAVSQASKMEIFLEPRVAAQIGDVISLTCSTTGCETPSFSWR
TQIDSPLNGKVKNEGNNSTLTMDPVSFNNEHAYLCTATCGSKKLEKGIQVEIYSFPKDPE
IQLSGPLEVGKPVTVTCLVRDVYPFDRLEMNLLNGNDLLQSKDFLEPMEKKSLETKSLEV
TFTPTNEDIGKGLVCRAQLHMDEIDFEPKERETTKELQVYISPRNTFISVTPSMRLQEGG
SVTMTCASEGLPPPQIFWSKKLDNGNLQLLSGNATLTLIAMRLEDSGTYVCEGVNEVGKD
GKEVELIVQEKPFTVEISPGPQIIAQIGDSVVLTCGVTDCESPSFSWRTQIDSPLSGTVK
VEGAKSTLTLSPVNLENEHSYLCTVTCGHKKLEKGIKVDLYSFPRDPEVEMSGLLVDGNP
VTVSCEVPNVYPSDRLEIELFKGETIIESKSFLEDMDKKSLETKSLEMTFIPTTEDTGKV
LVCLAKLHIDEMEFEPKQRQSTQTLYVNVAPRDTTVVVSPSSIVEEGSPVNMTCSSDGLP
APNILWSRRLSNGRLQSLSEDPILTLTSAKMEDSGIYVCEGINQAGISRKEVELIIQVAP
KDIQLIAFPSESVKEGDTVIISCTCGNVPKTWIILKKKAETGDTVLKSRDGAYTIHKVQL
EDAGVYECESKNEAGLQLRSLTLDVKGRENNKDYFSPELLVLYCASSLIIPAIGMIIYFA
RRANMKGSYSLVEAQKSKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggaagatggtcgtgatctttggagcctcaaatatactttggatggtgtttgct
gtttctcaagcttcgaaaatggagatcttccttgaacccagagtcgctgctcagattggt
gatgtcatttctctgacttgcagtacgacgggctgtgagaccccatctttctcttggaga
acccagatagacagtccactgaatgggaaagtgaagaatgaggggaacaattccacgttg
accatggaccctgttagcttcaacaatgaacatgcttacttgtgtacagcgacttgtgga
tcgaagaaactggaaaaaggcattcaagtggagatttattctttccctaaggacccagag
atccaactgagtggccccctagaagttgggaagccagtcacagtcacgtgtttggtccgt
gatgtttacccatttgacaggctggagatgaatttgctgaatggcaatgatctcctacag
agtaaggactttctagagcctatggagaagaagtccctggagaccaagagtttggaggta
accttcactcctaccaatgaggatattgggaaaggtcttgtttgccgagcacaattacac
atggatgaaattgactttgagcccaaagaaagggagactaccaaagagctacaagtctac
atctcacccaggaacacatttatctctgtgactccctctatgaggctgcaagaaggcggt
tctgtgacaatgacatgtgccagtgaaggcctaccacctccacagattttctggagcaaa
aaattagataatgggaatctacagctcctctctgggaatgcaactctcactttaattgct
atgaggctggaagattctggaacatatgtctgtgaaggtgtcaatgaagtcgggaaggat
ggaaaagaggtggaattaatcgttcaagagaaaccattcactgttgagatctccccagga
ccccagattatcgctcagatcggtgattcagttgtgttaacatgtggtgtcacagactgc
gagtccccatctttctcttggagaacccagatagatagtcctctgagtgggacggtgaag
gttgaaggggccaagtctacgctgaccctaagccctgtgaatttggagaatgaacattct
tatctgtgcaccgtgacctgtggacataagaaattggaaaagggaattaaggtggacctc
tactcattccctagagatccagaggttgagatgagtggtctactagtggatggaaaccca
gtcactgtgagctgcgaggttcctaatgtgtatccttctgaccgactggagattgaatta
tttaagggggagactatcatagaaagtaaaagctttctggaggacatggacaagaaatct
ctagaaactaagagtttggaaatgaccttcatccccaccacagaagatactggaaaagtt
cttgtttgtctggctaagttacatattgatgaaatggaatttgaacccaaacaaaggcag
agtacacagacactttatgttaatgttgcccccagggatacaaccgtcgtggtcagcccc
tcctccatcgtggaggaaggtagtcctgtgaacatgacctgctctagcgatggccttcca
gctccgaacatcctgtggagcaggcggctaagtaatgggcgcctgcagtctctttctgag
gatccaattctcaccttaacttctgcaaaaatggaagattctggtatttatgtgtgtgaa
gggattaaccaggctggaataagcagaaaagaagtagaattaattatccaagttgctccg
aaagacatacagcttatagcttttccttctgagagtgtcaaggaaggagacactgtcatt
atctcctgtacatgtggaaatgttccaaaaacttggataatcctgaagaaaaaagcagag
acgggagacacagtgctaaagtccagagatggtgcatataccatccacaaggtccagtta
gaggatgcgggagtgtacgaatgtgaatctaaaaatgaggctggcttgcaattaagaagt
ttaaccctcgatgttaaaggaagagaaaataacaaggactatttttctccagaactactc
gtgctttattgtgcatcttccttgataataccagccattgggatgatcatttactttgcc
agaagagccaacatgaaggggtcatacagtcttgtagaagcacagaaatcaaaagtgtag
DBGET
integrated database retrieval system
