Canis lupus familiaris (dog): 474456
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Entry
474456 CDS
T01007
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X6
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
474456 (SHANK3)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
PDZ_6
Ank_5
SH3_9
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
474456
NCBI-ProteinID:
XP_038491411
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All DBs
Position
10:complement(16599507..16646609)
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AA seq
1810 aa
AA seq
DB search
MQLSRAAAAAAAAPAQPSAQLPPAPAPAPAPPGPLPRGAADGAPAGGQGGPGRRAEPQRA
PLPAASRPGSGPGAGAGMDGPGASAVVVRVGIPDLQQTKCLRLDPAAPVWAAKQRVLCAL
SHSLQDALNYGLFQPPSRGRAGKFLDEERLLQDYPPNLDTPLPYLEFRYKRRVYAQNLID
DKQFAKLHTKANLKKFMDYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDNAT
DLLKVLKNGGAHLDFRTRDGLTAVHCATRRRNAAALTTLLDLGASPDYKDSRGLTPLYHS
ALGGGDALCCELLLHDHAQLGTTDENGWQEIHQACRFGHVQHLEHLLFYGADMGAQNASG
NTALHICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDV
VPFRETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGEVQPAASPGPSLRSLPHQLLLQ
RLQEEKDRDRDGDQENDIGGPTAGRGSQSKISPSGPGGPGAPPGPGPAPPAPPAPPPRGP
KRKLYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPAD
CVEEVQMRQYDTRHETREDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAVLQKRDHEGFG
FVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGH
KQVVALIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEEL
ASIRRRKGEKLDEILAAATEPTLRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGL
PGPEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDSMREGRGIPPPPQTAPPP
PPAPYYFDSGPPPAFSPPPPPGRAYDTVRSSFKPGLEARLGAGATGLYEAGAPLGPLPYP
ERQKRARSMIILQDSAPEVGDVPRPPPAVTPPERPKRRPRPPGPDSPYANLGAFSASIFA
PSKPQRRKSPLVKQLQVEDAQERAALAVGSPGPGGGSFAREPSPTHRGPRPGGLDYGPAD
SPGLAFGGPGPAKDRRLEERRRSTVFLSVGAIEGSPPSAELPSLQPSRSIDERLLGAGAA
PTTGRDLLLPSPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALAS
QAPSRSPTPVHSPDADRPGPLFVDVQARDSERGALASPAFSPRSPAWVPVPARREPEKAP
REERKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGQEPSGLGAEEERPSTPELAPAPP
QSAVAAEPLASPRAQPPGSAPPTDPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREEL
ARIGLVPPPEEFANGVLLATPLPGPGPSPTTVPGPASGKPSSEPPPAPESAADSGVEEAD
TRSSSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSP
LGKGPVTFRDPLLKQSSDSELMAQQHHAASAGLASAAGPARPRYLFQRRSKLWGDPVESR
GLPGPEDDKPTVISELSSRLQQLNKDTRSLGEEPVGGLGGLLDPAKKSPIAAARLFSSLG
ELSTISAQRSPGGPGGGASFPVRPGGRYPVARRAPSPVKPASLERVEGLGAGAGGAGRPF
GLTPPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPAPGPGPGAPGPRRPFQ
QKPLQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNI
ERALRQLDGS
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgagccgcgccgccgccgccgccgccgccgcccctgcgcagccctcggctcag
ctgccccccgcgcccgccccggccccggccccccccggccccctcccgcgcggcgcggcc
gacggggctccggcgggggggcagggggggccggggcgccgtgcggagccccagcgcgcc
ccgctcccggccgcgagccgcccgggctccggcccgggtgccggcgcggggatggacggc
cccggggccagcgcggtggtcgtgcgcgtcggcatcccggacctgcagcagacgaagtgc
ctgcgtctggacccggccgcgcccgtgtgggccgccaagcagcgcgtgctgtgcgccctc
agccacagcctccaggacgcgctcaactacgggctcttccagccgccctcgcggggccgc
gccggcaagttcctggacgaggagcggctcctgcaggactacccgcccaacctggacacg
cccctgccctacctggagtttcgatacaagaggcgagtgtacgcgcagaacctcatcgat
gataagcagtttgcaaagcttcacacaaaggcaaacctgaagaagttcatggattacgtc
cagctgcacagcacggacaaggtggcccgcctactggacaaggggctggaccccaatttc
cacgatcctgactcaggagagtgtcctctgagccttgcggcccagctggacaacgccacg
gacctgctgaaggtgctgaagaacggcggcgcccacctggacttccgcactcgcgacggg
ctcacggccgtgcactgtgccacccgccggcgcaacgcggcagccttgacgaccctgctg
gacctgggcgcctctcctgactacaaggacagccgcggcctgacgcccttgtaccacagc
gccctggggggcggggatgccctgtgctgtgagctgctgctgcacgaccacgctcagctg
ggtaccacagatgaaaacggctggcaggagatccaccaggcgtgccgctttgggcatgtg
cagcacctggagcatctgctgttctacggagctgacatgggggctcagaacgcctcaggg
aacacggccctgcacatctgtgccctttataaccaggagagctgtgctcgcgtcctgctt
ttccgcggagctaacaaggacgtccgcaattacaacagccagacagccttccaggtggcc
atcatcgcagggaactttgagctcgcagaggtcatcaagacccataaagactcagatgtt
gtaccattcagggaaacccccagttatgcaaagcggcggcggctggctggccccagtggc
ctggcctcccctcggcccctgcagcgctcagccagtgacatcaacctgaagggtgaggtg
caaccggcagcttctcctggaccttcgctgcgaagccttccccatcagctgctgctccag
cggctgcaggaggagaaagaccgggatcgggatggtgaccaagaaaatgacatcggtggc
cccacagcaggcaggggcagccagagcaagatcagcccgagcgggcccggcggccccggc
gcgccccccggccccggccccgcgccccccgcgccccccgcgccgccgccgcggggcccg
aagcggaaactttacagcgcggtccccggccgcaagttcatcgccgtgaaggcgcacagc
ccgcagggcgagggcgagatcccgctgcaccgcggcgaggccgtcaaggtgctcagcatt
ggggagggcggtttctgggaggggaccgtgaaaggccgcacgggctggttcccggccgac
tgcgtggaggaggtgcagatgaggcagtatgacacacggcatgaaacccgggaggaccgg
acgaagcgccttttccgccactacacagtgggctcctatgacagcctcacctcacacagt
gattatgtcattgatgacaaggtggccgtcctacagaaacgggaccatgaaggctttggt
tttgtgctccggggagccaaagcagagacccccatcgaggaattcacgcccacgcccgcc
ttccctgcgctccagtatcttgagtcggtggatgtggagggtgtggcctggagggccggg
ctgcgcacaggagacttcctcattgaggtgaacggggtgaacgtggtgaaggttggccac
aagcaggtggtggctctgatccgccagggcgggaaccgcctcgtcatgaaggttgtgtct
gtgacaaggaaacccgaagaggatggggctcggcgcagagccccaccgccccccaagagg
gcccccagcaccacgttgactctgcgttccaagtccatgacggcagaacttgaggaactt
gcctccattcggagaaggaaaggggagaagctggatgagatcctggccgccgccacggag
ccgaccctgaggccggacatcgcggacgccgactcaagagccgccactgtcaaacagcgg
cccaccagtcggaggatcacccctgccgagatcagctctctgtttgagcgccagggcctc
ccaggcccagagaagctgcccggctcccttcggaaggggattccacggaccaagtctgta
ggggaggatgaaaagctggcgtccctcctggaggggcgcttcccgaggagcacgtccatg
caagattccatgcgcgagggccgaggcatcccgccacccccccagactgcgccgccaccc
ccaccagccccctactacttcgactcggggccgccccccgccttctcgcctccgccgccc
ccgggccgcgcctacgacactgtgcgctccagctttaagcccggcctggaggcgcgcctg
ggcgcgggggccacaggcctgtatgaggccggggcgcccctggggccgctgccctacccc
gagcggcagaagcgcgcgcgctccatgatcatcctgcaggactcggcgcccgaagtgggc
gacgtcccgcggccacctccggctgtcaccccgcctgagcggcctaagcggaggccacgg
ccgccaggccccgacagcccgtacgccaacctgggtgccttcagcgccagcatcttcgca
ccctccaagccccagcgccgcaagagccccctggtgaagcagctgcaggtggaggacgcc
caggagcgtgccgccctggccgtcggcagccctggcccgggtggtggcagctttgcccgc
gagccctccccgacgcaccgcggccctcggcccggcgggctcgactacggccccgctgac
agccctggcctggctttcggcggcccggggccggccaaggaccggcggctggaggagcgg
cgccgctccaccgtgttcctgtcggtgggagccatcgagggcagcccccccagcgccgag
ctgccctccctgcagccctcccgctccatcgacgagcgccttctgggcgccggcgccgcc
cccaccaccggccgcgacctgctcctgccctcccccgtctctgctctgaagccattggtg
agcggcccgagccttgggccttcaggctccaccttcatccacccgctcaccggcaagccc
ctggaccccagctcgcccctggccctggccctggccgcgcgggagcgggctctggcctcc
caggcgccctcccggtcccccacgcctgtgcacagccccgacgctgaccgtcccgggcct
ctatttgtggatgtgcaggcccgcgactccgagcgaggggccctggcctccccagccttc
tccccaagaagtccagcctgggtccctgtgcctgctcgcagggagccggagaaagcaccc
cgggaggagcggaagtcgccggaggacaagaagtccatgatcctcagcgtcctggacacg
tctctgcagcggccggctggtctcatcgtcgtgcatgccaccagcaacgggcaggagccc
agcgggctgggggctgaagaggagcggccgagcaccccggagctggcccccgcccctcca
cagtcggcagtggcggcggagcccctggctagcccccgggcgcagccccccggcagcgcc
ccgccgacagaccccgggcccggccagggcagctcggaggaggagccagagctggtgttt
gccgtgaacttgccgcccgcccagctgtcctccagtgatgaggagaccagggaggagctg
gcccgcattgggctggtgccgcctcctgaagagtttgccaacggggtcctgctggccacc
ccccttcctggcccaggtccctcgcccaccacggtgccaggcccggcctcagggaagccg
agcagcgagcccccgcctgcgcctgagtctgcagctgactcaggggtggaggaggccgac
acgcgcagctccagcgacccccacctggagaccacaagcacgatctccacggtgtccagc
atgtccacgctgagctcagagagtggggaactcactgacacccacacctccttcgccgat
ggacacacttttctactcgagaagccaccagtgcctcccaagcccaagctcaagtccccg
ctggggaaggggccggtgaccttcagggacccgctgctgaagcagtcctcggacagcgag
ctcatggcccagcagcaccacgccgcctctgctgggttggcctctgctgctggacctgct
cgccctcgctacctcttccagagaaggtccaagctgtggggggaccccgtggagagccgg
gggctccctgggcccgaagatgacaaaccaactgtgatcagtgagctcagctcccgcctg
cagcagctgaacaaagacacacgctccttgggggaagagccggtcggtggcctgggcggc
ctgctggaccctgccaagaagtcgcccatcgcggcagctcggctcttcagcagcctcggt
gagctgagcaccatctcagcgcagcgcagccccgggggcccgggcggcggggcctcgttc
ccggtgcggcccggcggccgctaccccgtggcaaggcgcgccccgagcccggtgaagccc
gcgtcgctggagcgggtggaggggctgggggcgggcgcggggggcgcggggcggcccttc
ggcctcacgccccccaccatcctcaagtcgtccagcctctccatcccgcatgagcccaag
gaggtgcgcttcgtggtgcgcagcgtgagcgcgcgcagccgctcgccctcgccgtcgccg
ctgccctcgcccgcgcccggccccggccccggggcgcccggcccgcgccggcccttccag
cagaagccgctgcagctctggagcaagttcgacgtgggcgactggctggagagcatccac
ctgggcgagcaccgcgaccgcttcgaggaccacgaaatcgagggcgcgcacctgccggcg
ctcaccaaggacgacttcgtggagctgggcgtcacgcgcgtgggccaccgcatgaacatc
gagcgcgcgctcaggcagctggacggcagctga
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integrated database retrieval system
