Canis lupus familiaris (dog): 474470
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Entry
474470 CDS
T01007
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03013
Nucleocytoplasmic transport
cfa05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
474470 (NUP50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
474470 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
474470 (NUP50)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
474470 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
UPF0731
Motif
Other DBs
NCBI-GeneID:
474470
NCBI-ProteinID:
XP_038492873
Ensembl:
ENSCAFG00000000856
VGNC:
44056
LinkDB
All DBs
Position
10:complement(20751101..20771376)
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AA seq
461 aa
AA seq
DB search
MAKRIAEKELTDRNWDQEDEAEEVGTFSVASEEVLKNRAIKKAKRRNVGFESDSGGAFKG
FKGLVVPSGGGGFSGFGNGAGGKPLEGLSNGSSITSASPFSSARTATESKAAFGSIAANG
PTSLVDKKILTPKTNGDSQQPSSSGLTSSAACPRNAYHKQLAALNCSVRDWIVKHVNTNP
LCDLTPIFKDYEKYLAGIEQQHGGGGGRSSESETNKMPLATQSPSLFGSTKLQQESTFLF
PGHKAEDASEKKTDLSVGAASASFNFGKKIDSSVLGSLNSGPLTGFSFSSGNSSLFGRDL
TQNKSMSSPFYTKTLEVQPEGGSSECKGGDEEENDEPPKVVVTEVKEEDAFYSKKCKLFY
KKDNEFKEKGVGTLHLKPTANQKTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNVLIV
CVPNPPIDEKNAAAPVTMLIRVKTGEDADELHKILLEKKDA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaattgctgagaaggaattgacagataggaattgggatcaagaagatgaa
gcagaagaggtgggaacattctcagtggccagtgaggaagtcttgaagaatagagccata
aagaaagcaaagcgtagaaatgttggatttgaatctgatagtggaggggcctttaaaggt
tttaaaggtttggttgtaccttctggaggaggagggttttctggatttggtaatggcgct
ggaggaaagcctttggaaggactgtctaatggaagcagcataactagcgcctctcccttc
tccagtgcaaggacagcaacagagagcaaggcagcctttggatctattgctgcaaatggt
cctacctccttggttgataaaaagattttaactcccaaaactaatggtgacagtcagcag
ccctcctcctctggccttacctctagtgcagcctgcccccgcaatgcctatcacaagcag
ctggctgccttgaactgttctgttcgggactggatcgtgaagcacgtgaacacaaaccca
ctgtgcgacttgacgcctatctttaaagactatgagaaatacctagcgggaatcgaacag
cagcacgggggcggtggcggcaggagttctgaaagtgaaactaacaaaatgccacttgca
acacagtccccttccctattcgggtcaacaaaactgcagcaagagtcaacatttctcttt
cctggccacaaggcagaggacgcatctgaaaagaagacagacctttctgtaggagcagca
agtgcctcgtttaactttggcaagaagatcgatagttctgtcttggggtccttaaactct
ggcccactaactggattttcgttttcttctggaaactccagtttatttggcagagatctt
acccagaataaatcaatgtcttcaccattttacacgaaaacattggaggtacaacctgaa
ggcggcagtagcgaatgcaaaggcggagatgaagaagagaatgatgagccacctaaagta
gtagttactgaagtaaaagaagaagatgctttttactccaaaaagtgtaaactcttttac
aagaaagacaacgaatttaaagagaaaggtgtgggtactttgcatttaaaacctacagcg
aatcagaagacacaactgttagtgcgggcggacaccaatttaggcaacatactgctgaat
gtcctgattccacccaacatgccatgtacccggacagggaagaacaacgtcctcatcgtg
tgcgttccaaatccgcccatcgatgagaagaatgccgccgccccagtcaccatgttaatc
cgggtaaaaacgggcgaggatgcggacgagttgcacaaaattttactggagaaaaaggat
gcctga
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