Canis lupus familiaris (dog): 474508
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Entry
474508 CDS
T01007
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
474508 (DDX17)
Enzymes [BR:
cfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
474508 (DDX17)
Spliceosome [BR:
cfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
474508 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
474508
NCBI-ProteinID:
XP_022280011
Ensembl:
ENSCAFG00000001395
VGNC:
39846
LinkDB
All DBs
Position
10:26237306..26258327
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AA seq
780 aa
AA seq
DB search
MEDGYCVCKPTCTRRPVFRPAFGTRQNLLFSKQNALRTLRIFAIVGRPNLPTVFITPILC
VLLPSPTREAATVASATGDSASERESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIRAPL
PDLYPFGTMRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFE
KNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHF
TEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLA
PTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLES
GKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFL
RDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRC
DDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVI
NYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQL
VDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETD
RAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSGYTAQEYGAGTYGASSTTSTG
RSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggttattgtgtctgcaaaccaacttgcacaaggaggcccgtgttccgtccc
gcgttcggaacccggcaaaatcttctattctccaaacagaatgcgttacgcacactgcgc
atcttcgcaatagtgggccggccaaacctacccacagtttttataaccccgattctctgt
gttttgctcccgtctccgacgagagaggcggcgacggtggcgtctgcgacgggagacagc
gcgtcggagcgagagagcgccgcgcctgccgccgccccaacagcggaggcgccgccgcca
tcggtcgtcaccagaccggagccgcaggccctcccgagcccggccatccgtgccccgctc
ccagatctctatccgtttgggaccatgcgcggaggcggctttggggaccgggaccgggat
cgtgaccgtggaggatttggtgcaagaggtggtggtggccttcccccaaagaaatttggt
aatcctggggagcgtttacgtaaaaagaagtgggatttgagtgagctccccaagtttgag
aagaatttttatgtagaacatccagaagtggcaagactgactccgtatgaggttgatgaa
ctacgccgaaagaaagaaattacagtgagagggggagatgtttgtcctaaacctgtgttt
gccttccatcatgctaacttcccacaatatgtaatggatgtgttgatggatcaacacttt
acagaaccaactccgattcagtgccagggatttcctttggctctcagtggtcgagatatg
gtgggcattgctcagactggctctgggaagactctggcgtatttgctgcctgcaattgtt
catattaaccaccagccctacttggaaagaggagatggcccaatttgtctagttctggct
cctaccagagagcttgcccagcaagtacagcaggtggctgatgactatggcaaatgttct
agattgaagagtacttgcatttatggaggtgctcccaaaggtccccaaattcgagacttg
gagagaggtgttgagatctgtatagctactcctgggcgcctgatagatttcctggagtca
ggaaagacaaatcttcgccgttgtacttaccttgtactggatgaggctgacaggatgctt
gatatgggctttgaacctcagatccgtaaaattgttgaccaaatcaggcctgataggcag
acattgatgtggagcgcaacctggccaaaagaagtaagacagcttgcagaggatttcctt
cgtgattacacccagatcaacgtgggcaatctggagttgagtgccaaccacaacatcctc
cagattgtggatgtctgcatggaaagtgaaaaagaccacaagttgatccagctcatggag
gaaataatggctgagaaagaaaataagacaataatatttgtagagacaaagagacgctgt
gatgacctcactcgaaggatgcgcagagatggttggccagctatgtgtatccatggagac
aagagtcaacctgaaagagattgggtacttaatgagttccgttcaggaaaggctcccatc
ctcattgccacagatgtagcctcccgtgggctagatgtggaagatgtcaagtttgtgatc
aactatgactatccaaacagctcagaggattatgtgcaccgtattggccgaacagcccgt
agcaccaacaagggcaccgcctacaccttcttcaccccagggaacctaaagcaggccaga
gagctgatcaaagtgctggaagaggctaaccaggctatcaacccaaaactgatgcagttg
gtggaccacagaggaggcggcggaggagggggtaagggaggtcgttctcgataccggacc
acttcttcagccaacaatcccaatctgatgtatcaggatgagtgtgaccggaggcttcga
ggagtcaaggatggtggccggagagactctgcgagctatcgggatcgtagtgaaaccgat
agagccggttatgctaacggcagtggctatggaagtccaaattctgcctttggagcacaa
gcaggccaatacacctatggtcaaggcacctatggggcagctgcttatggcaccagtggc
tatacagcccaagaatatggcgctggcacttatggggctagtagcaccacctcaactggg
agaagttcacagagctctagccagcagtttagtgggataggccggtctgggcagcagcca
cagccactgatgtcacaacagtttgcacagcctccaggagctaccaatatgataggttac
atggggcagactgcctaccaatacccccctcctcctcctccccctcctccttcacgtaaa
tga
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