Canis lupus familiaris (dog): 474616
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Entry
474616 CDS
T01007
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X2
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfa01009
]
474616 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
474616 (VPS54)
Protein phosphatases and associated proteins [BR:
cfa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
474616 (VPS54)
Membrane trafficking [BR:
cfa04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
474616 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
YqzH
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
474616
NCBI-ProteinID:
XP_005626212
Ensembl:
ENSCAFG00000003153
VGNC:
48298
UniProt:
A0A8C0NZZ0
A0A8I3PB93
LinkDB
All DBs
Position
10:complement(63487248..63565630)
Genome browser
AA seq
965 aa
AA seq
DB search
MASSHSSSPVPQGSSSDVFFKKEVDPTKHIRPVQSLPDVCPKEPTVTDQHRWTVYHSKVN
LPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVYQQEISQREKIHE
RCKNICPPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFNSVLPWSHFNTAG
GKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHELQDYLKKTSQAV
KMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQPTVQVLLSTSEF
VGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFSTYSHSDLNRPLED
DCQILEEERLVSLVFGLLKQRKLNFLEIYSEEMIITAKNIIKQCVINKVSQIEEIDTDIV
MKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVLDKNRRTRELEEI
SQQKNVTKDNSLDTEVAYLIHEGMFISDAFNESELTPIAIDTTSQRNASPNSEPCSSDSV
SEPECTTDSSSSKEQTSSSATPGGVDIMVNEDMKLTDLELEKLANNIQELLYSASDICHD
RAVKFLMSRAKDGFLEKLNSTEFITLSRLMETFILDTEQICGRKSMSLLGALQSQANKFV
NRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSISGGKIALPEKKSGATEERKPAEVL
IVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYFNSRSCQLVLGAG
ALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLQPKQYSMLRHFDHITKDYHD
HIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAIFDLLPEEQTQM
LFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKGLKDLDLNMSEI
WEQKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagcagtgatgttttcttt
aaaaaagaggtagatccaacaaaacacattcgacctgtgcagtcactgccagacgtatgt
cccaaggaacccacagttacagatcaacatagatggactgtatatcattccaaagtaaac
ctcccagcagcattaaatgatcctagattagcaaaaagagaatctgacttcttcacaaaa
acatggggattggactttgtggacactgaagtcataccttcattctacctcccacagatc
agcaaggaacattttacagtgtatcaacaggaaatctctcagagagagaagattcatgag
agatgcaagaatatttgtcctcctaaagatacctttgacaggactctcttacatactcat
gataaatccaggacagatctggagcaagtacctaagatttttatgaaaccagattttgcc
ttggacgattccttaacttttaattcagttttaccatggtctcattttaatactgctggt
ggaaaaggaaatcgtgatgcagcttcctcaaagttgctacaagaaaagctgagccattat
ctggatattgtggaagtaaacattgctcaccagatctctctacgttccgaagcatttttt
catgcaatgacctctcaacacgaattgcaggactacctcaagaaaacttcccaggctgta
aagatgcttcgagataagattgcacagattgataaagtaatgtgtgaaggatcactacac
attttaagactggcacttaccagaaacaattgtgtgaaagtgtacaataaactcaagtta
atggccactgtacaccagactcagcctacagtacaggtgttgttatccacttctgaattt
gttggagcattggacttaatagcaacaacacaagaggttctacagcaggaacttcagggc
attcacagcttccggcatttgggatcacaactttgtgaattagaaaaactgatagataaa
atgatgattgcagaattttctacttattctcacagtgacttaaacagaccactggaagac
gattgtcaaattttagaagaggaaaggcttgtatctcttgtatttggacttttaaaacaa
agaaaacttaattttttagaaatctatagtgaagaaatgattattacagcaaagaatatc
attaaacagtgtgtgattaataaagtatcacaaatagaagaaattgacacagatattgtt
atgaagcttgcagatcagatgagaatgttgaattttcctcagtggtttgatttgctaaag
gatattttctctaagtttacaattttcctacaaagagttaaggcaacgttaaatatcatt
cacagtgttgttctctcagttctcgacaaaaaccgaaggaccagagaattggaagagatt
tcacaacagaagaatgttacaaaagacaattcactggacacagaggtggcttatttaatc
catgaaggcatgtttataagtgatgcattcaatgagagtgaattaacacctatagcaatt
gatactacctctcaaagaaatgcatctccaaatagtgagccctgcagcagtgattcggta
tccgaaccagaatgtactactgattcttcatccagcaaagagcagacatcatcatctgct
actccaggaggtgtggatattatggtcaatgaagacatgaaattaactgatttagagcta
gaaaaactggcaaataatatccaggaattattgtatagtgcctcagatatatgccatgat
cgagctgttaaatttctcatgtcaagagcaaaggatggttttcttgagaagctaaattcc
acggaattcataacactttctagattaatggaaacattcattttagatactgagcagatc
tgtggaagaaaaagtatgtcattacttggagcacttcagagccaagctaataaatttgta
aacagatttcatgaagagagaaaaactaagctcagcctcctcttagacaatgagcgctgg
aagcaagctgatgttcctgcagaatttcaggatcttgttgattctatatcaggtggaaag
attgctttacctgaaaaaaagtcaggggctacagaagaaaggaaaccagctgaagttctc
attgttgagggacaacagtatgctgtcgttggaactgtattgctcttgataagaattatc
cttgaatattgccagtgtgtggacaatatcccatctgttactactgacatgcttacacgt
ctgtcagatttattgaagtacttcaattcaagaagttgccagttagttcttggagctggt
gcactgcaagttgttggactaaaaacaataacgacaaaaaatttggctctttcttcacgt
tgtttgcagttaattgtgcactacattcctgtgatccgggctcattttgaagctcggctg
cagcctaagcaatatagcatgcttaggcattttgatcatatcactaaggactaccatgac
cacatagctgaaatatcagctaagcttgtagcgataatggatagcttatttgacaagcta
ttatctaagtatgaggtgaaagctcccgttccttctgcctgtttcaggaatatttgtaag
caaatggcaaaaatgcatgaagctatatttgatcttcttccagaagaacaaacacaaatg
ttatttttaagaattaatgcaagttataaactccacttgaaaaagcagttatctcattta
aatgtgataaatgatggaggacctcaaaatgggttggtcacagcagatgtagctttttac
actggaaatcttcaagccttaaaaggtcttaaagatttggacctaaatatgtccgagatc
tgggaacagaagaggtga
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