Canis lupus familiaris (dog): 474674
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Entry
474674 CDS
T01007
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X2
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03440
Homologous recombination
cfa03450
Non-homologous end-joining
cfa04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
474674 (RAD50)
03450 Non-homologous end-joining
474674 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
474674 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfa03032
]
474674 (RAD50)
03400 DNA repair and recombination proteins [BR:
cfa03400
]
474674 (RAD50)
DNA replication proteins [BR:
cfa03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
474674 (RAD50)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
474674 (RAD50)
BRCA1-C complex
474674 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
474674 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad50_zn_hook
SbcC_Walker_B
AAA_21
DUF2703
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
474674
NCBI-ProteinID:
XP_038521778
Ensembl:
ENSCAFG00000000867
VGNC:
51759
LinkDB
All DBs
Position
11:19500587..19730384
Genome browser
AA seq
1213 aa
AA seq
DB search
MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQ
EDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEK
ACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRK
KQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLL
NQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFHKL
VRERQEREAEIASQLMNDFAEKETLKQEQIDEIRDKKTGLGRIIELKSEILSKKQNELRN
VKYELQQLEGSSDRILELDQELSKAERELSKAEKNSNVEVLKTEVISLQNEKADLDRTLR
KLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDW
LHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFE
SDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVIS
DLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNR
DIQRLKNDIEEQETLLGTIMPEEESAKVCLTDITIMERFQMELKDVERKIAQQAAKLQGL
DLDRTVQQVNQEKQEKQHKLDTVSSKMELNRKLIQDQQEQIQYLKSTTNELKSEKLQIST
NLQRRQQMEEQTVELSTEVQSLSREIKDAKEQLSPLETILEKFQQEKEELINKKNKSNKI
AQDKMNDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKENELNQVIAQLSECEKHKENINK
EMGIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQK
LEEKIDNIKRNHSLAIGRQKGYEEEIIHFKRELREPQFRDAEEKHREMMIVMRTTELVNK
DLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKR
RNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDR
ENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI
VTCNVSSLGSYVH
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgtactcagaaaagcaaaaagacggaatttaaaaccctggaaggagtcattact
agaacaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagag
atgataagttctcttggtgtttccaagtctgtgctaaataatgtcattttttgtcaccaa
gaagactctaattggcctttaagtgagggaaaggccctgaagcaaaaatttgatgagatt
ttttcagcaacaaggtacattaaagccttggaaacacttcggcaggtacgtcagacacaa
ggtcagaaagtaaaagaatgtcaaacagaattaaaatatttgaagcaaaataaggaaaaa
gcttgtgagatacgtgatcagattactagtaaggaagcccagttaacatcatcaaaggaa
attgtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaa
caaaatctctctaaaataatgagacttgacaatgaaattaaagccttggatagccgaaag
aagcaaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaaggg
actgatgagcaactaaatgacttatatcacaatcaccagagaacagtaagggagaaagaa
aggagactggtagactgtcagcgtgaactggaaaagttaaataaagaatcaaggcttctc
aatcaggaaaaatcagaactgcttgttgagcagggtcgtctacagctacaagcagatcgg
catcaagaacatatccgagctagagattcattaattcaatctttggcaacacagctagaa
ttggacggctttgagcgtggaccattcagtgaaagacatattaaaaattttcacaaactt
gtgagagagaggcaagaaagggaagcagaaattgccagccaactgatgaatgactttgca
gaaaaagagactctgaaacaagaacagatagatgagataagggataagaaaactggactg
ggaagaataattgagctaaaatcagaaatcctaagtaagaagcagaatgagctgagaaat
gtgaagtatgaattacagcagttggaaggatcttcagacaggattcttgaactggaccag
gagctctcaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaagtt
ctaaaaacagaagtaataagccttcaaaacgagaaagcagacctagacaggaccctgcgt
aaattggaccaggagatggaacagttaaaccatcatacaacaacacgcacccagatggaa
atgctgaccaaagacaaagctgacaaagatgaacaaattagaaaaataaaatctcgacac
agtgatgaattaacttcattgttaggatattttcccaacaaaaaacagcttgaagactgg
cttcatagtaaatcaaaagaaattaatcagaccagggacagactggccaaattgaacaaa
gaactagcttcggctgagcaaaataaaaatcatataaataatgaactaaaaaggaaagaa
gagcagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggactttgaa
agtgatttagataggcttaaagaagaaattgaaaaatcctcaaaacagcgagccatgcta
gctggagctacagcagtttactctcaattcattactcagctaacggatgaaaaccagtca
tgttgccctgtctgtcagagggtttttcaaacagaagctgaattacaggaagtcatcagt
gatttgcagtctaagctgcggcttgctccagataaactcaagtcaacagaatcagaacta
aagaaaaaagaaaagcggcgtgatgaaatgctgggacttgtccctatgaggcaaagcata
attgatttgaaggaaaaggaaataccagaattaagaaacaaactgcagaatgtcaataga
gacatacagcgcttaaagaatgacatagaggaacaggaaacgctcttaggcacaataatg
cctgaagaagaaagtgctaaagtttgtctgacagatattacaattatggagaggttccag
atggaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctgcaaggacta
gacttggatagaactgttcaacaagtaaaccaggaaaaacaagaaaaacaacacaaatta
gatacagtttccagtaagatggaattgaatcgtaagcttatacaggaccagcaggaacag
attcaatacctaaaaagtacaacaaatgaacttaaatcagagaaacttcagatatccact
aatttacaacgtcgacagcaaatggaggaacagactgtggaattatccactgaagttcag
tccttatccagagagataaaggatgctaaagagcagttaagccctttggaaacaatattg
gagaagttccaacaggaaaaagaagaattaatcaacaaaaaaaataaaagcaacaaaata
gcacaggataaaatgaatgatatcaaagaaaaggttaaaaatattcatggttatatgaaa
gacattgagaattatattcaagatgggaaagatgactataagaagcaaaaagaaaatgaa
cttaatcaagtaatagctcaactaagtgaatgtgagaaacacaaagaaaatataaataaa
gaaatgggaatcatgagacaagatattgatacacagaagatccaagagagatggctacag
gataaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaa
cagcatttgaaggaaatgggtcaaatgcaggttttacaaatgaagaatgaacatcagaag
ttggaagaaaaaatagacaatataaaaagaaatcacagtttggcaataggacgacagaaa
ggctacgaggaagaaattattcattttaaaagagaacttcgagaacctcaatttcgggat
gcagaggaaaagcacagggaaatgatgattgttatgagaacaacagagcttgtgaacaag
gatcttgacatttattataagacccttgatcaagcaatcatgaaatttcacagtatgaaa
atggaggaaatcaacaaaattatacgtgacctttggcgaagtacctatcgtggacaagat
attgaatacatagaaattcggtctgatgccgatgaaaatgtatccgcttctgataaaagg
cggaattataactaccgcgtggtgatgctaaaaggagacacagccttggatatgagagga
cgatgcagtgctggacaaaaggtactggcctcactcatcattcgtctggcgttggctgaa
acattctgcttgaactgtggcatccttgccttggatgagccaacaacaaatcttgaccga
gaaaacattgagtctcttgcacatgctcttgttgagataattaagagtcgctcacagcag
cgtaacttccagcttctggtcatcactcacgatgaagattttgtagagctcttaggccgc
tctgaatatgtggagaaattctacaggattaagaagaacatcgatcagtgctcagagatt
gtgacatgtaatgttagctccctgggttcttacgttcattaa
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integrated database retrieval system
