Canis lupus familiaris (dog): 474772
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Entry
474772 CDS
T01007
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X2
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03013
Nucleocytoplasmic transport
cfa03015
mRNA surveillance pathway
cfa03040
Spliceosome
cfa05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
474772 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
474772 (NCBP1)
03015 mRNA surveillance pathway
474772 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
474772 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
474772 (NCBP1)
03041 Spliceosome [BR:
cfa03041
]
474772 (NCBP1)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
474772 (NCBP1)
Spliceosome [BR:
cfa03041
]
Common components
Common spliceosomal components
Cap binding complex
474772 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DUF1690
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
474772
NCBI-ProteinID:
XP_022281342
Ensembl:
ENSCAFG00000002445
VGNC:
43645
LinkDB
All DBs
Position
11
Genome browser
AA seq
723 aa
AA seq
DB search
MQKICESSARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYL
VRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWVGKELYEK
KDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLKKDRWQER
HILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGPVMPGSH
SVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELFQLPAPPH
IDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHLSNFQFR
WSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPANPTCIYKY
GDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFNPLKIEVF
VQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDK
MIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLA
RQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVR
CETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAVFQQFCA
LQA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagatttgtgaatccagtgcacgcctgttacctgagaagttgacaatttataca
acattagttggactgctgaatgccaggaattacaattttggtggagagtttgtagaagct
atgattcgtcagcttaaagaatcactgaaagcaaacaactataatgaagctgtatatttg
gtccgttttttatctgatcttgtgaattgtcatgtcattgctgccccatccatggttgct
atgtttgaaaattttgtaagtgtaactcaggaagaagatgtacctcaggtgcggcgagat
tggtatgtgtatgcctttctgtcatctttgccctgggttggaaaggagttatacgaaaag
aaagatgcagagatggaccgcatctttgccaacactgaaagctatcttaaaagacgccaa
aaaacacatgtgcccatgttacaagtatggactgctgagaaaccacacccgcaagaagag
tatttagattgcctgtgggcccagattcagaaattgaaaaaggatcgctggcaggagcgg
cacatcctaagaccttatcttgcctttgacagcatcctgtgtgaagcattgcaacacaat
ctgcctccttttacaccacctccgcacacggaagattcagtgtacccgatgccaagggtc
atcttcagaatgtttgattacacagatgatcccgaaggtcctgtaatgccagggagtcat
tcagttgaaagatttgtaatagaagagaatcttcactgcatcattaagtctcactggaag
gaaaggaagacttgtgctgcacagttggtgagctatccagggaagaacaagatccccttg
aactaccacatagttgaggtgatttttgcagagctgtttcagcttccagcacccccgcac
attgatgtgatgtacacaacactgcttatcgagctgtgcaaactccagcctggctctcta
ccccaagttcttgcacaggcaactgaaatgttatatatgcgtttggacacgatgaacact
acatgtgtagacaggtttattaattggttttcccatcatctaagtaacttccagttccgt
tggagctgggaagattggtcagattgtcttactcaagatcctgaaagtcccaaaccaaag
tttgttagagaagttctagaaaaatgtatgaggttgtcttaccatcagcgtatattagat
attgttcctcctaccttctcagctctatgtcctgcaaacccaacctgcatttacaagtat
ggagatgaaagtagcaattctcttcctggacattcagttgccctctgtttagctgttgcc
tttaaaagtaaagcaacaaatgatgaaatcttcagcattctgaaagatgtaccaaatcct
aaccaggatgatgatgatgatgaagggttcagctttaacccactgaaaatagaggtcttt
gtacagactctgctacacttggcagccaaatcattcagccactcctttagtgcccttgca
aagtttcatgaagtcttcaaaaccctagctgagagtgatgaaggaaagttacatgttcta
agagttatgtttgaggtctggaggaaccatccacagatgattgctgtactagtagataag
atgatccgtacacagattgttgactgcgctgcggtggctaattggatcttctcttcagaa
ctgtcacgagactttactagattgtttgtttgggaaattttgcactccacaattcgtaag
atgaacaaacacgttctcaaaatccagaaagagctagaagaagctaaagaaaaacttgca
aggcaacacaaacggcgaagtgatgatgatgacagaagcagtgacaggaaagatggggct
ctagaggagcaaatagaaagactgcaggaaaaagtagaatctgctcagagtgaacagaag
aacctcttccttgtcatattccagcgatttatcatgatcttgactgagcacttagtacga
tgtgagactgacgggaccagtgtattaaccccatggtataagaactgtatagagaggctc
cagcagatcttcttacagcatcaccaaataatccagcagtacatggtgaccctggaaaac
ctgctcttcactgctgagttagaccctcatatcctggctgtgttccagcagttctgtgcc
ctacaggcctaa
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