Canis lupus familiaris (dog): 474778
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Entry
474778 CDS
T01007
Symbol
COL15A1
Name
(RefSeq) collagen alpha-1(XV) chain isoform X4
KO
K08135
collagen type XV alpha
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
474778 (COL15A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cfa00535
]
474778 (COL15A1)
Proteoglycans [BR:
cfa00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
474778 (COL15A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
474778
NCBI-ProteinID:
XP_005626921
Ensembl:
ENSCAFG00000002525
VGNC:
39460
UniProt:
A0A8P0N5J9
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Position
11:54457575..54563053
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AA seq
1374 aa
AA seq
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MAPRRDARSWRLLWLLSVSALLPAPTRTRSATELASQGPLDLTELIGVPLPSSVSFVTGY
GGFPAYSFGPGANVGRPARTLIPPTFFRDFAISVTVKPSSASGGVLFAITDAFQKVIYLG
LRLSGVEDGGQRVILYYTEPGSHVSHEAAAFLVPVLTHRWNRFAVIVQGEEVTLLMDCEE
HSHISFQRSSRALAFEPSAGIFVGNAGATGLERFTGSIQQLTIHPDPRTPEEMCETEESS
ASGESSGLQEPEGVAEILEAVTYTQAPSKEAKVEPINAPPTPSPPSDDTELSGEPVPEGT
AETVNLSVSLHSIPEQGSGEVLNDTLEEVHTVDGAPITDVGSGDGAFIHVTEEAVHTEEG
LAATEATGEAEVPTSTAGEAEASSMPTRGPALSLSTEDMGERVTLSVDAEEGSGATAAGE
AEVPDGTANETEADSVPTEGATLSMAVQDPGTGVTLGAVAEGMFTASAATTEVPGSTSEE
EEARQVPTGGLVPLPPTAAPEQAGAPGPGDEGELAAAVTAEPLPTAEAEAPEVGGSLPER
PPLPVPTVASERGVTPGEAGEGLFGHPEPARPTGPTVETEAEGSGLGWGSEIGFGSGDLV
RSEELLRGPPGPPGPPGSPGIPGKPGTDVFMGPPGSPGEDGAAGEPGPPGPEGQPGPDGA
SGLPGMKGEKGARGPNGSVGEKGDPGNRGLPGPPGKNGQVGSPGIMGPPGPPGPPGPPGP
GCAMGLGFEDTEGSGSIRLLHEPRISGPVAPSGPKGEKGDQGPKGDRGMDGASIVGPPGP
RGPPGRIEVLSSALTNITHGFMNLSDIPELIGPPGPEGIPGLPGFPGPRGPKGDTGVPGF
PGLKGEQGEKGEPGAILTGDIPLERLQGKKGEPGVHGAPGPMGPKGPPGHKGEFGLPGRP
GRPGLNGLKGAKGDRGVMMPGPPGLPGPPGPPGPPGAVINIKGAVFPIPARPHCKTPVDT
IHPGNSELITFHGVKGEKGSWGLPGSKGEKGDQGAQGPPGPPVDPTYLRHFLNSLKGENG
DRGIKGEKGDSHGDFLVSGPPGLPGSPGLVGQKGETVVGPQGPPGAPGLPGPPGFGRPGS
PGPPGPPGPPGPPAILGAAVALPGPPGPPGQPGLPGSRNLVTAFSSMDDMLQKAHLVIEG
TFIYLRDSTEFFIRVRDGWKKLQLGELIPIPADSPPPPAFSSNPHQLPPPRMPLSSISYE
RPALHLVALNTPFSGDIRADFQCFQQARAAGLLSTYRAFLSSHLQDLSTVVRKAERYSLP
IVNLKGQVLFNNWDSIFSGHGGQFNAQVPIYSFDGRDVMTDPSWPQKVVWHGSSTHGVRL
VDKYCEAWRTADMAVTGLASPLSTGKILDQKTYSCANRLIVLCIENSFMTDARK
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaggagggacgcgcgctcctggcgcctgctgtggctgctctcggtctccgcg
cttctccccgcgcccacccggacccgctcggcgacagagttggcttcccagggccccctg
gacctcacggagctcatcggcgtcccgctgccctcatctgtgtcctttgtcacgggctat
ggtggcttcccagcctacagcttcgggcctggtgccaacgtcggccgcccagccaggacc
ctcatcccacccaccttcttcagggacttcgccatcagcgtcacagtgaagcccagcagt
gccagcggtggggtgctctttgctatcaccgatgccttccagaaggtcatctacctgggc
ctgcggctctcgggcgtggaggatggtggccagcgggtcatcctctactacacggagcca
ggctcccatgtgtcccatgaggctgctgccttcctggtgcctgtgttgacccaccggtgg
aaccgctttgcggtgatcgtccagggcgaggaggtgaccctcctcatggactgtgaagag
cacagccacatctccttccagcggtcctcccgggccttggctttcgagcccagtgcaggg
atcttcgtgggcaatgcaggagccacggggctggagagattcaccggctccatacagcag
ctcaccatccaccctgaccccaggacccctgaggagatgtgtgaaactgaagaatcctcg
gcgtcaggagagagcagcgggcttcaggagccagagggagtagctgagatcttagaagct
gtcacctacactcaagccccctctaaagaagcaaaagttgaacccataaacgcacctcca
actccatcccctccttctgacgacacagaactttcgggtgagcccgtacccgaggggact
gcggaaactgtcaacttgagcgtcagcctgcatagcatcccagagcaagggtctggtgaa
gtcctgaatgacacactggaggaagttcatactgtggacggtgcccccattacagatgtt
ggctcgggggatggggccttcattcatgtcactgaggaggctgtgcatactgaagaaggt
ttggcagccacagaggccaccggggaggctgaggtgcccaccagcactgccggggaagcg
gaggccagcagtatgcccaccagggggccagctctctccttgtccactgaagatatgggg
gaaagggtcactctgagtgtagatgctgaagaaggctcgggagccacagcagctggggag
gccgaggtgcctgatggcaccgccaacgaaacagaggccgacagtgtgcccacagaggga
gcgaccctctccatggccgtccaggaccctgggacaggggttaccctgggtgcagtcgct
gaaggaatgttcacagcatcagcagccacgacggaagtgcccggcagcacgtctgaggag
gaggaggctcgccaggtccccacgggtggcctggttcccctcccacccacagcggccccc
gagcaagcgggcgcgcccgggcctggtgatgagggagagctggcagcagctgtgaccgcg
gagccccttcccacggctgaggctgaggcgccagaggtgggcggcagcctcccggagcgg
cccccgctgcccgtacccacagtggcctctgaaagaggggtcactccgggtgaagctggg
gaggggctttttggccaccctgaacctgccaggcctactggacccacggtggaaactgag
gccgagggctccggcctgggctggggctccgaaattgggtttggctctggggacttggta
cgcagtgaagagctgttaaggggtcccccaggtcccccgggccctcctggctcacctggg
attccaggaaaaccaggaactgatgttttcatgggaccccctggatcgcctggagaggat
ggagctgctggtgaacctgggcccccgggccccgagggacagcctggacctgatggagcc
tccggccttcctgggatgaagggagagaagggagcaagagggcctaatggctccgttggt
gaaaagggtgacccaggcaacagaggcttaccaggacctccagggaaaaatggacaagtc
ggcagtcccgggatcatgggacctccagggcctcctggacccccaggacccccaggccct
ggatgtgcaatgggacttgggtttgaggatactgaagggtccggaagcatcaggctattg
catgaaccgagaatctccggaccagtggctccaagtggtcccaaaggagaaaaaggagac
cagggacccaagggtgacagagggatggatggagccagcattgtggggccccccggaccc
agggggccaccaggtcgcatcgaagtcctgtctagtgctttgaccaacatcacccatgga
ttcatgaatctctcggacatccctgagctcattgggcctccgggtccggagggcataccc
gggctgccaggatttccaggccctcgaggaccaaagggtgacactggcgtgcctggattt
ccaggactaaaaggagaacagggcgagaagggagagccaggtgccatcctgaccggagat
attcctctggaacggctgcaggggaaaaagggtgaacctggagtgcacggagccccggga
ccaatggggcccaaaggaccgccaggacacaaaggagagtttggccttcctggacgacct
ggtcgcccgggactcaatggcctcaagggcgccaaaggagaccgaggggtcatgatgccg
ggcccacctggcttacctggtcctccgggtccccctgggcctcctggagctgtgattaac
atcaaaggagctgtcttccccataccagcgcggccgcactgcaaaacaccggttgatacc
attcatccggggaattcagaacttatcacctttcatggtgttaaaggagaaaaaggatcc
tggggtcttcctggctccaaaggagaaaaaggcgaccagggggcccagggaccaccaggc
cctccagtggatccaacttacctgagacactttctaaacagcttgaagggggagaatgga
gacagggggatcaaaggagaaaaaggagactctcacggtgatttcttggtgtcagggcct
ccaggcctgccgggaagtcctggcttggttggccagaagggggagactgtcgttgggccc
cagggacccccgggtgctcctggcctgcctgggcctcctggctttggaagacctggttcc
cctgggccaccgggacccccagggcccccaggaccaccagctatccttggtgcagctgtg
gcccttccgggtccacccggccctccaggacagccagggcttcccggatccagaaacctg
gttacggcatttagcagcatggatgacatgttgcagaaagcacacttggttattgaaggg
acattcatctacctgagggacagcactgagttcttcattcgggtccgagatggttggaag
aaattacagctgggagagctgatccccattccggctgacagcccaccgccccccgccttc
tccagcaatccacatcagcttccgcctccacggatgcccctttcaagcatcagttacgag
aggcctgcgctgcacctggttgccctgaacacgccattttctggggacatccgagctgat
tttcagtgcttccagcaggccagggctgcggggctgttgtccacctaccgagcattctta
tcctcccatctgcaagacctctccacggtggtgaggaaagcagagagatacagccttcca
atagtgaacctcaagggccaagtacttttcaacaattgggactcaattttttctggccat
ggaggacagttcaatgcacaggttccaatatactcctttgatggccgagacgtgatgacg
gatccttcctggccccagaaggtcgtttggcacggctccagcacccacggagtgcgtctt
gtggataagtactgtgaagcgtggcgaaccgctgacatggcagtcacgggactggcctcc
ccactgagcacagggaagattctggaccagaaaacatatagctgcgctaataggctaatt
gttctgtgtattgaaaacagtttcatgacagatgctaggaagtaa
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