Canis lupus familiaris (dog): 474807
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Entry
474807 CDS
T01007
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X2
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
474807 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
474807 (PRPF4)
Spliceosome [BR:
cfa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
474807 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
474807
NCBI-ProteinID:
XP_022280663
Ensembl:
ENSCAFG00000003224
VGNC:
45025
LinkDB
All DBs
Position
11:66046127..66063767
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AA seq
279 aa
AA seq
DB search
MLSFVFVRSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADG
SVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEG
HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIA
TGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWS
PLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgctttcctttgtatttgttaggagtgggctttgcaagctctggtcagttcccgattgc
aatctgcttcacaccctccgaggccataacacaaacgtaggcgcaattgtattccatcca
aaatccaccgtgtccttggaccaaaaagatgtcaatctggcctcttgtgctgcggatggt
tctgtgaagctttggagccttgacagtgacgagccagtggcggacattgaaggccataca
gtgcgtgtggcacgtgtaatgtggcatccatcaggacgtttcttgggcaccacctgctat
gaccgctcgtggcgcttatgggatttggaggctcaagaggagatcctgcatcaggaaggc
cacagcatgggtgtgtatgacattgccttccatcaagatgggtctttggctggcactggg
ggactggatgcatttggtcgtgtttgggacttgcgcacaggacggtgtatcatgttccta
gaaggtcacctgaaagaaatctatggaataaatttctcccccaatggctaccacattgca
actggcagtggtgacaacacctgcaaagtgtgggaccttcgacaacggcgttgtgtctat
accatccctgcccatcagaacttagtgactggtgtcaagtttgagcctatccatgggaat
tttctgctcactggtgcttatgataacacagccaagatctggacccacccaggctggtcc
ccactgaagactctggctggccatgaaggcaaagtgatgggcctagacatctcttctgat
gggcagctcatagccacttgctcatacgacaggaccttcaagctctggatggctgaatag
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