Canis lupus familiaris (dog): 474833
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Entry
474833 CDS
T01007
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X3
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
474833 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cfa01007
]
474833 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfa03016
]
474833 (VARS2)
Enzymes [BR:
cfa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
474833 (VARS2)
Amino acid related enzymes [BR:
cfa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
474833 (VARS2)
Transfer RNA biogenesis [BR:
cfa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
474833 (VARS2)
Prokaryotic type
474833 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
474833
NCBI-ProteinID:
XP_005627178
Ensembl:
ENSCAFG00000000454
VGNC:
48232
LinkDB
All DBs
Position
12:819638..832091
Genome browser
AA seq
1092 aa
AA seq
DB search
MPRSPLASLPSRCWGLGPSQALRRSHPLSTQSEPCRSSLSRRNHEAKQKRQREKQMALEA
GITPKGKAPAGSSKAWTPKEVVLYEVPTEPGEKKDVYRLLPPAYSPRYVEAAWYSWWVRE
GFFKPEYQTRLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWI
PGSDHAGIATQAVVEKQLWKERGMRRHELSREKFLREVWKWKDEKGGEISEQLQALGASL
DWDRECFTMDAGFSVAVTEAFVRLYEAGLLYRSQQLVNWSCTLRSAISDIEVESRPLPGH
TELQLPGCPTPVSFGLLVSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDSRYTHL
HGRQLRHPLTGQLLPLITDSTVQPHVGTGAVKVTPAHSPADAELGARHGLSPLSVIAEDG
TMTSLCGDWLQGLHRFVAREKIISALRERGLFRGLQNHPMVLPICSRSGDVIEYLLKSQW
FVRCREMGDRAAQMQVRCRKGSSNGLSVQAVESGALELSPSFHQKNWQHWFSHIGDWCVS
RQLWWGHRIPAYLVVEEHMKGDGEDCWVVGRTETEARKIAAELTGRSEAELTLQRDPDVL
DTWFSSALFPFAALGWPQETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFT
KVLLHSMVRDGQGRKMSKSLGNVLDPRDIISGVELQVLQEKLKDGNLDSTELAIAAAAQL
CRHLPPFLSLWLQRKDFPHGIPECGTDALRFALCSHRALGGDVHLSVSEVLSSRHFCNKI
WNALRFILNALGEGFVPQPAEELSPSSPTDAWILSRLAHTAQECERAFLARELPLITHAL
HHFWLHSLCDVYLEAVKPVLSHSPHPQGPPQVLFSCADVGLRLLAPLMPFLAEELWQRLP
PRPGSNSAPSISVAPYPTTHSLEHWRQPALEQHFSQVQEAVQVLRALRATYQLTKARPRV
LLQSSEPGELSLFKPFLEPLATLGHCGAVGLLPPGVAAPSGWAQAPLSDTIQVYMELQGL
VDPQAHLALLAARRRKLQKQLDGLMAWTPSGGEEETKRQQRLSSLQLELSKLDKAASHLR
QLTDACPSPKEL
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttcgcccttggcctcgcttccatcacggtgctgggggctcgggccctctcag
gccctccgcaggtcccaccctctctctacccagtcagagccgtgccggtcctccctctcc
cggaggaaccatgaagccaaacagaagcgccagcgggagaagcagatggcgctggaggct
gggatcaccccgaagggcaaggcacctgcaggatccagtaaggcctggactcctaaggag
gtagtgttgtatgaagtccccacggaaccgggtgaaaagaaagatgtgtaccgcctcctg
cctcctgcatacagtcctcgctacgttgaggcggcctggtactcctggtgggtgcgagag
ggcttcttcaaaccggagtatcagaccaggctgccccaggccacaggggagacgttttcc
atgtgtatcccacctcccaatgtcactggctccctgcatatcggtcatgcactgacagta
gccatacaggatgccctggtgcgctggcaccggatgcgtggggatcaggtgctatggatc
cctggctcagatcatgcaggaattgctacacaagctgtggtggagaagcaactgtggaag
gagcgaggaatgaggagacatgaactgagccgggaaaaattccttagggaggtgtggaag
tggaaggacgagaaaggtggagagatcagtgagcagctccaagctctgggggcctccctg
gactgggaccgagagtgcttcactatggatgctggcttctcagtggccgtgaccgaagct
tttgtgcgactctacgaggcaggattgttgtaccggagccagcagcttgtcaactggtcc
tgcactttaagatcagccatctcggatattgaggtggagagccggcccctgcctggccac
acggagcttcaactgcctggctgccccactcctgtgtcttttggcctccttgtgtctgtg
gccttccctgtggatggagagcctgatgcagaggtcgtggtaggaactacaaggccagag
acgttgcctggagacgttgctgtggctgttcatcccgacgactcccgatacacacacctg
catgggcgacagcttcgtcaccccttgactgggcagcttctccccctcatcacagactcc
actgttcagccacatgtgggcacaggggcagtgaaggtgactccagcgcatagccctgct
gatgctgagctgggggcccgacacggcttgagccctctgagtgtcatcgcggaggatggc
accatgacctctctctgtggggactggctacagggtcttcaccgatttgtggcccgggaa
aagattatatctgcgctgcgggagcggggcctgttccggggcctccagaaccaccccatg
gtgcttcctatttgcagccgttctggggacgtgatagaatatctactgaagagccagtgg
tttgtccgctgccgggagatgggggaccgagctgcccagatgcaagtgaggtgcaggaag
ggaagctctaacggcctttctgttcaggccgtggagtcaggggctctggagctcagtcca
tccttccaccagaagaactggcagcactggttttcccacatcggggactggtgtgtctcc
cggcagctgtggtggggccatcggattcccgcctacctggttgtagaggagcacatgaag
ggtgatggagaagactgttgggtggttgggcggacagagaccgaggccagaaaaatagct
gcagaactgactgggagatcagaggcagagctgaccctgcagagggatcctgatgtcctg
gacacatggttctcttcggctcttttcccctttgctgccttgggctggccccaagagacc
ccagaccttgctcgtttctaccccctgtcacttttggaaacaggcagtgatctcctgttg
ttctgggtgggccgcatggtcatgttggggacacagctcacagggcagctccccttcacc
aaggtgcttcttcattccatggttcgggacgggcagggccggaagatgagcaagtccctg
gggaatgtattggacccacgagacatcatcagtggggtggaactgcaggtgctgcaggaa
aagctgaaggacgggaacttggactccacagagctggcgattgcggctgcggcacagctg
tgtaggcatctgccacccttcttatccctctggttgcagaggaaggacttccctcatggg
atccctgagtgtgggacagatgccctgcgatttgccctgtgctcccacagggccttgggg
ggcgatgtacacttgtccgtctctgaggtcttgagttcccggcatttctgcaacaaaatc
tggaatgccctgcgttttatcctcaatgccttaggagagggatttgtaccgcagcctgca
gaggagctatccccctcatcccccacggacgcctggatcctgagccgtctggcccacact
gcccaggagtgtgagcgagccttccttgctcgggagctgccactcatcacccatgccctc
caccacttctggctccacagcctctgtgatgtctacttggaagctgtgaagccagtgctt
tcgcactcgccccatccccaaggcccgcctcaggtcctgttctcctgcgctgatgtgggt
ctccgcctcctcgccccactgatgcccttcctggctgaagagctctggcagaggctgcca
cccaggcctggcagcaactctgcccctagcatctctgttgctccctaccccaccacccat
agcttggagcactggcgccagcctgcgctggaacaacacttctctcaggtccaggaggct
gtgcaggtactgagggccctccgagccacgtaccagctcaccaaggcccggccccgagta
ctgctgcagagctcagagcctggagagctgagcctcttcaagcccttcctggagcccttg
gccacactgggccactgtggggccgtgggcctgttacccccaggtgtagcggcaccctcc
ggctgggctcaggccccactcagtgacaccattcaggtgtacatggagctacagggcctg
gtggacccccaggcccatctggctctgctagctgcccgaagacgcaagttgcagaagcag
ctggatggcctcatggcctggaccccatcagggggagaggaagagactaagaggcagcag
aggctttcttccctccagctggagttgtcaaagctggacaaggcagcctctcacctccgg
cagctgacggatgcatgtcccagccccaaggagctctga
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