Canis lupus familiaris (dog): 474871
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Entry
474871 CDS
T01007
Symbol
VPS52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
474871 (VPS52)
Membrane trafficking [BR:
cfa04131
]
Protein recycling
Others
EARP complex
474871 (VPS52)
Endosome - Golgi transport
Tethering complex
GARP complex
474871 (VPS52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Sec3_C-term
COG6_N
Dor1
DUF1664
ATG16
Motif
Other DBs
NCBI-GeneID:
474871
NCBI-ProteinID:
NP_001041553
Ensembl:
ENSCAFG00000000941
VGNC:
48296
UniProt:
Q5TJF0
LinkDB
All DBs
Position
12:complement(2778649..2793972)
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AA seq
723 aa
AA seq
DB search
MAAAATMAAAARELLLRAGTSDMEEEEGPLGGGPGLQEPLPLGELDISSDEFILDEVDVH
IQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLIVPSA
LIMAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGILDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYY
RSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPTELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGSAAHDLFHAVMG
RTLGMTLKHLESYLTDCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPRF
ELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTVPNERTMQLLGQLQ
VEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEF
IEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDV
MRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHK
PNF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgcgaccatggcggcggctgcgcgagagctgctgctgagagccgggacc
tcggatatggaggaggaggagggcccgctggggggtggccctggtcttcaggagccattg
ccacttggagaattggacatctcctctgatgaatttattctggatgaagtggatgttcac
attcaggcaaatctggaggatgagttagtaaaggaagctcttaaaacgggtgtggatctc
cgtcactattcaaagcaggttgagctggaactacagcagattgagcagaaatccattcga
gattatatccaggagagtgagaacatagcgtctctccacaaccagatcacagcctgcgat
gctgttcttgagcgcatggagcagatgttgggagcttttcagagtgacctcagctctatt
agctctgagatccggacactgcaggaacagtcaggagccatgaatattcggcttcgaaac
cgccaggcagttcggggaaaacttggggaacttgtcgatggtctgatagtgccctctgct
ctgatcatggcaattctggaggcaccagtgacagagcctaggttcctggagcagctgcag
gaactggatgccaaggcggctgcagtccgagagcaggaggctagaggcacagcggcttgt
gctgatgtcagaggcatacttgaccggctacgggtgaaggcggtgacgaagatccgagag
ttcatccttcagaagatttattccttcagaaaaccaatgaccaactatcagatcccccag
acggccctgctcaagtacaggttcttctaccagtttctgctgggcaatgaacgggcaacg
gcaaaggaaatcagggatgagtatgtggaaacgctgagcaagatctacctgtcttactat
cgctcttacctagggcggctcatgaaagtgcagtatgaggaagttgccgagaaggatgat
ctaatgggtgtggaagacacagcaaagaaaggattcttctcaaagccttccctccgcagc
aggaacaccatcttcaccctggggacccgtggctctgtcatctcccccactgaactggag
gcccccatcctggtgccccacactgcccagcggggagaacagaggtatccatttgaggcc
ctcttccgcagccagcactacgccctcctagacaattcttgccgtgaatatcttttcatc
tgcgaattctttgttgtatccggctcggctgcacatgatctcttccatgctgtcatgggt
cgcacccttggcatgaccctgaaacacctggagtcctatctcacggactgctacgatgcc
attgctgtttttctctgtatccacatcgtcctccggttccgtaacattgcagcgaagagg
gatgttcctgccctggacaggtactgggagcaagtgcttgccttgctgtggccacggttt
gagctgatcctggagatgaatgtccagagtgtccgaagcactgaccctcagcggctaggg
gggctggatactcggccccactatatcacgcgccgatatgcagagttctcgtctgctctt
gtcagcatcaatcagacagttcccaatgaacggacaatgcagctgctaggacagctacag
gtggaagtggagaattttgtcctccgagtggcagctgagttctcctcaaggaaggagcaa
cttgtgtttttgatcaacaactatgacatgatgctgggcgtgctaatggagcgggctgca
gatgacagcaaagaggttgagagtttccagcagctgctcaatgctcggacacaggaattc
attgaagagttgttgtctcccccttttgggggtctggtggcatttgtgaaggaagccgag
gctttaattgaacgtggacaggctgagcgacttcgaggggaagaagcccgggttactcaa
ctgatccgtggctttggtagttcctggaaatcatcagtggagtctctgagtcaggatgta
atgcggagtttcaccaacttcagaaatggaaccagtatcatccagggagctttgacccag
ctgatccagctctatcatcgcttccaccgggtactctctcagccccagctccgagctctc
cctgcccgagcagagcttatcaacattcatcaccttatggtggagctcaagaagcacaag
cccaacttttga
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