Canis lupus familiaris (dog): 475152
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Entry
475152 CDS
T01007
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03020
RNA polymerase
cfa03420
Nucleotide excision repair
cfa05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
475152 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
475152 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
475152 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
475152 (POLR2B)
03400 DNA repair and recombination proteins [BR:
cfa03400
]
475152 (POLR2B)
Enzymes [BR:
cfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
475152 (POLR2B)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
475152 (POLR2B)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
475152 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
475152
NCBI-ProteinID:
XP_013974298
Ensembl:
ENSCAFG00000002296
VGNC:
44793
UniProt:
A0A8I3S0M4
A0A8P0N5D8
LinkDB
All DBs
Position
13:48982054..49028661
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgatgaagatgatgatgaaatcacgccagac
ttgtggcaagaagcatgctggattgtaatcagttcctattttgacgagaaaggcttggtc
agacaacagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgctccacctatagacctacaagctgaagctcagcatgctagtggagaagttgaagaa
ccgccaagatacttgctgaagtttgaacaaatttacctctccaagcctacccattgggaa
agagatggtgctccttcgccaatgatgccaaatgaggccaggttaagaaatctcacgtat
tctgctccactttatgttgatataacaaaaacagtcattaaagaaggtgaagaacaactt
caaactcagcatcagaaaacttttataggaaaaattccaattatgttgcgttcaacttac
tgcctgttgaatggcttaacagatcgtgatctttgtgagttaaatgaatgccctttggat
cctggtggatatttcattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gcgacaaacaccgtctatgtgttcgctaaaaaggattctaaatatgcctacacaggagag
tgtagatcatgtctggagaattcttcccgacccacaagtactatttgggttagcatgctg
gcaagaggaggacagggtgcaaaaaagagtgctattggtcaacgcattgtggcaactcta
ccatatatcaagcaggaagttcccatcattattgtgtttagagcattaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagatccagagatgatggaaatg
gtgaaaccttctctcgatgaagcttttgtcatccaggagcagaatgttgcactaaatttc
attggctcaagaggggcaaagcctggggtcactaaagagaaaagaattaaatatgcaaaa
gaagtcttacaaaaagaaatgctccctcatgttggtgtcagtgacttttgtgagaccaaa
aaagcttattttttggggtacatggttcataggttgcttctagcagccttgggtagaaga
gaattagatgacagggatcactatggaaacaaaagattggatcttgctgggccactgctt
gcattcttatttagaggtatgtttaagaatttgcttaaagaagtgcggatctatgcacag
aagtttattgatcgaggaaaggattttaacttggagttggcaattaaaacaaggattata
tctgatggcctaaaatattccttagctactggaaactggggtgaccaaaagaaagctcat
caagccagagctggagtatctcaggtattaaaccgcctgacttttgcatctactctttct
caccttcgtcgtttgaattcacctattggtagagatggcaagctagcaaaaccaagacag
ttgcataatacattgtggggaatggtgtgtcctgctgagaccccagagggccatgctgta
ggacttgtgaagaatttagccctgatggcttatatttcagttgggtctcagccttctcca
attctggaatttttagaagaatggagtatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggttgctgggttggaatacataaagatcct
gaacaacttatgaacactctaaggaaattgcggcgtcagatggacatcattgtgtctgaa
gtttctatgatcagagatattcgagagagggagattcggatttatacagatgcaggccgt
atttgtaggccacttctgattgtagaaaaacaaaaactacttttgaagaagagacacatt
gatcagttgaaagagagagaatataacaactacagttggcaggatcttgtggccagtggg
gtagtagaatatattgatactctggaagaagaaacagtgatgcttgcaatgactccagat
gatttacaggaaaaagaagtagcttattgttccacatatacacactgtgagattcatcca
tcaatgattcttggtgtctgtgcatctattattccctttcctgatcataaccagtcccct
agaaacacatatcagtctgctatgggtaagcaggctatgggagtttatatcaccaacttc
cacgttcgtatggatacactggcccatgttctgtattatcctcaaaaaccgcttgtgact
acacggtcaatggaatatctacgatttagagagcttccagcaggtatcaactccattgtg
gccattgcatcatacactggatataaccaagaagactctgttatcatgaatcgttcagct
gtagacagaggctttttcaggtctgtcttctatcgatcatataaagaacaggaatctaag
aaaggatttgatcaagaagaagtttttgagaagccaactcgcgaaacatgccagggtatg
aggcatgccatttatgacaagctggatgatgatggtttgatagctcctggagtccgtgta
tcaggagatgatgttattataggcaaaacagtcaccttgcctgaaaatgaagatgaatta
gagggcactaataggcgctataccaagagagactgtagcacatttcttagaactagtgag
actggcattgtggatcaggttatggtaactctcaaccaggaaggatataaattttgtaaa
ataagggtccgctctgttagaattccacagattggagacaaatttgctagtcgacatggt
caaaagggtacttgtggtattcagtacagacaagaggacatgccttttacctgtgagggt
atcacccctgatatcatcataaatccccatgccattccctctcgcatgactattggtcac
ttgattgaatgtcttcaagggaaggtatcagctaacaagggtgaaattggtgatgccact
ccatttaatgatgctgttaacgtgcagaagatttctaatctgttatctgattatggctac
catctcagaggaaatgaggtcctgtacaatggtttcactggtcgaaaaatcacgtcacag
atttttattggtcccacatattaccagcgtttgaagcatatggtggatgataagattcat
tctcgtgccaggggacctattcagatccttaatagacagcccatggagggtagatctcgt
gatggtggtctacgttttggagaaatggaacgagattgtcagattgcccatggagcagcc
cagtttttaagggaaagattgtttgaggcgtcagatccatatcaggttcatgtctgcaat
ctttgtggcataatggcgattgctaacacgaggacccatacatatgaatgccgaggctgc
cgcaataaaacccagatttctttggtgcgaatgccttatgcgtgcaagctgttgtttcag
gaacttatgtctatgagtattgcacctcgaatgatgagtgtttag
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integrated database retrieval system
