Canis lupus familiaris (dog): 475541
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Entry
475541 CDS
T01007
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03082
ATP-dependent chromatin remodeling
cfa04714
Thermogenesis
cfa05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
475541 (SMARCD3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
475541 (SMARCD3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
475541 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
475541 (SMARCD3)
03036 Chromosome and associated proteins [BR:
cfa03036
]
475541 (SMARCD3)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
475541 (SMARCD3)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
475541 (SMARCD3)
PBAF complex
475541 (SMARCD3)
GBAF(ncBAF) complex
475541 (SMARCD3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
475541
NCBI-ProteinID:
XP_005629745
Ensembl:
ENSCAFG00000004865
VGNC:
46539
UniProt:
A0A8C0QB23
A0A8I3N641
LinkDB
All DBs
Position
16:complement(15887117..15918657)
Genome browser
AA seq
470 aa
AA seq
DB search
MTPGLQHPPAVVQRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGLAPAGMEPARKRAA
PPPGQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLD
QTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIASWELRVEGKLLDD
PSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDLSVRCTLL
LMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQ
IFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMS
SFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYIQDLLRSQSRDLKV
MTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVVRNT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacgccaggccttcagcacccacccgccgtggtacagcgccccgggatgccgtctgga
gcccggatgccccaccagggggcgcccatgggccccccgggctccccgtacatgggcagc
cccgccgtgcgacccggcctggcccccgcgggcatggagcccgcccgcaagcgagcagcg
cccccgcccggccagagccaggcccagagccagggccagccggtgcccaccgcccccgcg
cggagccgcagtgccaagaggaggaagatggctgacaaaatcctccctcaaaggatccgg
gagctggtccccgagtcccaggcttatatggacctgctggcgtttgagaggaaactggat
caaaccatcatgcggaagcgggtggacatccaggaggctctgaagaggccaatgaagcaa
aagcggaagctgcgtctttatatctccaatacttttaaccctgcgaagcctgatgctgaa
gattccgatggcagcattgcctcctgggagctgcgggtggaggggaagctcctggatgac
cccagcaagcagaagcggaagttctcttccttcttcaagagtttggtcattgaactggac
aaagacctttatggccccgacaaccacctagtcgagtggcaccgaacacccacaacccag
gagacggatgggttccaggtgaagaggccaggggacctgagtgtacgctgcacactgctt
ctcatgctggactaccagcctccccaattcaaactggatcctcgcctggctcggctgttg
ggattgcacacacagagccgctcagccattgtgcaggccctgtggcagtatgtgaagacc
aacaggctgcaggattcgcatgataaggaatacatcaatggggacaaatacttccagcag
atttttgattgcccacggctgaagttttctgagattccccagcgcctcacagctctgctg
ctgccccctgacccaattgtcatcaaccacgtcatcagcgtggacccgtcggaccagaag
aagacggcgtgctatgatattgacgtggaggtggaggagccactgaagggacagatgagc
agcttcctcctgtccacagccaaccagcaggagatcagcgctctggacagtaagatccat
gagacgattgagtccataaaccagctcaagatccagagggacttcatgctaagcttctcc
agagaccccaaaggctacatccaagacctgctccgctcccagagccgggacctcaaggtg
atgacagatgtggcaggcaaccctgaggaggagcgccgggctgagttttaccaccagccc
tggtcccaggaagctgtcagccgctatttctactgcaagatccagcagcgcaggcaggag
ttggagcagtcgctggttgtgcgcaacacctag
DBGET
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