Canis lupus familiaris (dog): 475671
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Entry
475671 CDS
T01007
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X2
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
475671 (DDX1)
03016 Transfer RNA biogenesis [BR:
cfa03016
]
475671 (DDX1)
Enzymes [BR:
cfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
475671 (DDX1)
Spliceosome [BR:
cfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
475671 (DDX1)
Transfer RNA biogenesis [BR:
cfa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
475671 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
475671
NCBI-ProteinID:
XP_005630202
Ensembl:
ENSCAFG00000003686
VGNC:
39844
UniProt:
A0A8P0P5Y7
A0A8I3S1S5
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All DBs
Position
17:11375128..11409962
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AA seq
734 aa
AA seq
DB search
MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE
TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATK
GLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEF
TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEE
FKFPPKDGFVALAKASDSYVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAEQTLNNV
KQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLNLSQVRF
LVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP
TWVDLKGEDSVPDTVHHVVVPVNPKADRLWERLGKNHIRTDDVHAKDNTRPGANSPEMWS
EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQFSCVCLH
GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV
GRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHL
NCTISQVEPDIKVPVDEFDGKVTYGQKRAIGGGNYKGHVDILAPTVQELAALEKEAQTSF
LHLGYLPNQLFRTF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttatgcctgagattgctcaagctgtagaagagatggattggcttctcccaact
gatatccaggctgaatctatcccattgatcctaggaggcggtgatgtacttatggctgca
gaaacgggaagtggaaaaactggtgctttcagtattccagttatccagatagtttatgaa
actctgaaagaccaacaggaaggcaaaaaaggaaaaacaaccattaaaactggtgcttca
gtgctcaacaaatggcaaatgaacccgtatgatagaggatctgcttttgcaattgggtct
gatggtctttgttgtcaaagcagagaagtgaaagagtggcatggatgcagagctacaaaa
ggattaacgaaagggaagcactactatgaagtatcctgtcatgaccaaggtttatgcaga
gttgggtggtcttccatgcaggcttccttagacctaggtactgacaagtttggatttggc
tttggtggaacagggaagaaatcccataataaacaatttgataattatggagaggaattc
actatgcatgataccattggatgttaccttgatatagataaagggcatgtcaaattctcc
aaaaatggaaaagaccttggtctggcatttgaaataccaccacatatgaagaaccaagcc
ctctttcctgcttgtgttttgaagaatgctgaactaaaatttaacttcggtgaagaagaa
tttaagtttccaccaaaagatggttttgttgctcttgccaaggcatcggatagttatgtt
gtcaaatcgcagcacacaggtaacgcacaggtggcacaaaccaagtttcttcccaatgct
ccaaaagctctcatcgtcgagccctctcgagagttagctgaacaaactttgaataacgtc
aagcagtttaagaaatatattgataatcctaaattaagggagcttctgataattggaggt
gttgcagcgcgggatcagctctctgttttggataatggggtagatatagtcgttggcact
ccaggaagactagacgatttagtgtcaactggaaagctgaatttatcccaagttagattc
ctggtcctggatgaagctgatgggcttctttctcaaggttactctgattttataaatagg
attcacaatcagattcctcagattacgtctgatgggaaaagacttcaggtgattgtttgc
tctgctacattacattctttcgatgtgaagaagctgtctgagaagataatgcattttccc
acatgggttgatttaaaaggagaagactctgttccggacactgtacaccatgttgttgtc
cctgtgaatcccaaagctgacagactttgggaaaggcttgggaaaaaccacattagaact
gatgatgtacatgcaaaagataacacaaggcctggtgctaatagtccggagatgtggtct
gaagctattaaaatcctgaagggggagtatgctgtccgggcaatcaaggaacacaagatg
gatcaagcaattattttctgtagaaccaaaattgactgtgataacttggagcaatatttt
atgcaacaaggaggaggacctgataaaaaaggacaccagttctcatgtgtttgtcttcat
ggggacagaaagcctcatgagaggaagcaaaacttggaaagatttaagaaaggagatgtg
aggttcttgatttgcaccgatgtagctgccagaggaattgatatccatggtgttccttat
gttataaatgtcaccttgcctgacgaaaagcaaaactacgtacatcgaatcggcagagta
ggaagagctgaaaggatgggtctggccatttccctggtggcaacagagaaagaaaaggtg
tggtaccatgtatgtagcagccgtggaaaaggatgttataacacaagactcaaggaagat
ggtggttgtaccatatggtacaatgagatgcagttgctgtctgagatcgaagagcatctg
aattgcaccatttctcaggttgaaccagatataaaggtaccagtggatgaatttgatggg
aaagttacctatggtcagaaaagggccattggcggtggaaactataaaggccatgtggat
attttggcacctacggttcaagagttggctgcccttgaaaaggaggcgcagacatctttc
ctgcatcttggctaccttcctaaccagctgttcagaaccttctga
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