Canis lupus familiaris (dog): 475701
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Entry
475701 CDS
T01007
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
475701 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfa04121
]
475701 (TRIM54)
Ubiquitin system [BR:
cfa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
475701 (TRIM54)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
DUF8512
DUF349
Sina_RING
WHD_3
MIF4G_like_2
CoiA_N
COG2_C
UvrD_C
ZorA-like_t1
Zn_ribbon_FGT1_2
DD_DDX21-DDX50
DUF1421
Spectrin
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
475701
NCBI-ProteinID:
XP_005630313
Ensembl:
ENSCAFG00000004835
VGNC:
47826
UniProt:
A0A8C0S197
A0A8I3N499
LinkDB
All DBs
Position
17
Genome browser
AA seq
366 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFEALCSVLEERKAELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMEQFTVSVEHVAEMLRTIDFQPGASGEEEDEEVALDGEEGSAGPEEERPDGP
EGTGGH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacatagcatggacaacctg
gagaagcagctcatttgccccatctgcctggagatgttctccaaaccggtggtgatcctg
ccctgccagcacaacctgtgccgaaagtgtgccaacgatgtcttccaggcctcgaaccct
ctgtggcaatcccggggctccaccactgtgtcttcaggaggccgtttccgctgcccatct
tgcaggcatgaggttgtcctggacagacatggtgtgtatggcctgcagcgaaacctgcta
gtagagaacattattgacatttacaagcaggagtcttcccggccactgcactccaaggcc
gagcagcacctcatgtgtgaggagcacgaagaggagaagatcaatatctactgcctgagc
tgtgaagtgcccacctgctctctctgtaaggtcttcggtgcccacaaggactgtgaggtg
gccccactgcccaccatttacaaacgtcagaagagcgagctcagtgatggcatcgcaatg
ctggtggcaggcaacgaccgtgtgcaagcagtgatcacacagatggaggaagtgtgccag
accatcgaggacaacagccggaggcagaagcagctgcttaaccagaggttcgaggccctg
tgctccgtgctggaggagcgcaaggccgagctgctgcaggcgctggcccgcgagcaggag
gagaagctgcagcgcgtccggggcctcatccgccagtatggagaccacctagaagcctcc
tctaagctcgtggagtccgccatccagtccatggaggagccacagatggcgctgtacctc
cagcaggccaaggagctgatcaataaggtcgggacaatgtcgaaagtggagctggcagga
cggccagaaccgggctatgaaagcatggagcagttcaccgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccagcccggcgcttccggggaggaagaggatgaggag
gtggcattggacggggaagagggcagcgcagggccggaggaagagcggccggatgggccg
gaaggcactggcgggcactga
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integrated database retrieval system
