Canis lupus familiaris (dog): 475827
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Entry
475827 CDS
T01007
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A isoform X2
KO
K12876
RNA-binding protein 8A
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03013
Nucleocytoplasmic transport
cfa03015
mRNA surveillance pathway
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
475827 (RBM8A)
09122 Translation
03013 Nucleocytoplasmic transport
475827 (RBM8A)
03015 mRNA surveillance pathway
475827 (RBM8A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
475827 (RBM8A)
03041 Spliceosome [BR:
cfa03041
]
475827 (RBM8A)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
475827 (RBM8A)
Spliceosome [BR:
cfa03041
]
Complex C
Other components
EJC/TREX
475827 (RBM8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
475827
NCBI-ProteinID:
XP_005630785
Ensembl:
ENSCAFG00000023172
VGNC:
45426
UniProt:
A0A8P0TTV8
A0A8I3NI72
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All DBs
Position
17:complement(58190496..58194070)
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AA seq
173 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEGSRARMREDYDSVEQDG
DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY
ETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgctggaccttcatgaggctgggggcgaggattttgccatggatgaagat
ggggacgagagcatccacaaattgaaagaaaaggcaaagaaacggaagggccgcggcttt
ggctccgaagggtctcgagcgcggatgcgtgaggattatgacagtgtggagcaggatgga
gatgaacccggaccgcaacgctctgttgaaggctggattctctttgtcactggagtccat
gaggaagccaccgaagaagacatccatgacaaatttgcagaatatggggagataaaaaat
atccacctcaacctggacaggcgtacaggatacttgaagggatatactttagttgagtat
gaaacatacaaggaagcccaggctgctatggagggactcaatggccaggatttgatggga
cagccgatcagtgtggactggtgttttgttcggggtccgccaaagggcaagaggagaggt
ggccgaagacgcagcaggagtccagacaggaggcggcgctga
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integrated database retrieval system