KEGG   Canis lupus familiaris (dog): 475827
Entry
475827            CDS       T01007                                 
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A isoform X2
  KO
K12876  RNA-binding protein 8A
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03013  Nucleocytoplasmic transport
cfa03015  mRNA surveillance pathway
cfa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    475827 (RBM8A)
  09122 Translation
   03013 Nucleocytoplasmic transport
    475827 (RBM8A)
   03015 mRNA surveillance pathway
    475827 (RBM8A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfa03019]
    475827 (RBM8A)
   03041 Spliceosome [BR:cfa03041]
    475827 (RBM8A)
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     475827 (RBM8A)
Spliceosome [BR:cfa03041]
 Complex C
  Other components
   EJC/TREX
    475827 (RBM8A)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 475827
NCBI-ProteinID: XP_005630785
Ensembl: ENSCAFG00000023172
VGNC: 45426
UniProt: A0A8P0TTV8 A0A8I3NI72
LinkDB
Position
17:complement(58190496..58194070)
AA seq 173 aa
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEGSRARMREDYDSVEQDG
DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY
ETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq 522 nt   +upstreamnt  +downstreamnt
atggcggacgtgctggaccttcatgaggctgggggcgaggattttgccatggatgaagat
ggggacgagagcatccacaaattgaaagaaaaggcaaagaaacggaagggccgcggcttt
ggctccgaagggtctcgagcgcggatgcgtgaggattatgacagtgtggagcaggatgga
gatgaacccggaccgcaacgctctgttgaaggctggattctctttgtcactggagtccat
gaggaagccaccgaagaagacatccatgacaaatttgcagaatatggggagataaaaaat
atccacctcaacctggacaggcgtacaggatacttgaagggatatactttagttgagtat
gaaacatacaaggaagcccaggctgctatggagggactcaatggccaggatttgatggga
cagccgatcagtgtggactggtgttttgttcggggtccgccaaagggcaagaggagaggt
ggccgaagacgcagcaggagtccagacaggaggcggcgctga

DBGET integrated database retrieval system