KEGG   Canis lupus familiaris (dog): 475876
Entry
475876            CDS       T01007                                 
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X2
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04140  Autophagy - animal
cfa04142  Lysosome biogenesis
cfa04148  Efferocytosis
cfa05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    475876 (VPS41)
   04140 Autophagy - animal
    475876 (VPS41)
   04148 Efferocytosis
    475876 (VPS41)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    475876 (VPS41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cfa04131]
    475876 (VPS41)
Membrane trafficking [BR:cfa04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    475876 (VPS41)
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 Clathrin zf_RING_Vps8_fungal WD40_CDC20-Fz VPS18_solenoid_2nd WD40_Prp19 ANAPC4_WD40 Vps39_1 Beta-prop_EML_2 Beta-prop_THOC3 Beta-prop_HPS5 WD40_WDHD1_1st zf_RING_Vps8 zf-RING_5 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_IFT122_1st Frtz TPR_YpiA CFAP251_N Beta-prop_ACSF4 RIG-I_C zf-C3H2C3 Beta-prop_IFT140_2nd zf-RING_11
Other DBs
NCBI-GeneID: 475876
NCBI-ProteinID: XP_022260891
Ensembl: ENSCAFG00000003582
VGNC: 48291
UniProt: A0A8C0S4M2 A0A8I3PGH3
LinkDB
Position
18:10636490..10810220
AA seq 840 aa
MAEAEEQETESLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVKSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDSVTLIIGWGTSVKI
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDIVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVEKGDYDIAARKCQK
ILGKNTALWECEVYKFKEIGQLKAISPYLPRGDPILKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYHE
KQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIM
EELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGM
EIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEENICESC
LSPILPSDAAKPFSVVVFHCRHMFHKECLPVPSMSSPAQFCGICSAKHRGPGSAILEMKK
NT seq 2523 nt   +upstreamnt  +downstreamnt
atggcggaagcagaggagcaggaaaccgagtctctcgaagaatctacagatgagtctgag
gaagaagaaagtgaagaggaacccaaactgaagtatgaaaggctttccaatggggtaact
gaaatccttcagaaggatgcagctagctgcatgacagtccatgacaagtttttggcactg
ggcacacattatggcaaggtgtatttacttgatgtccaggggaacatcactcagaagttt
gatgtaagtcctgtgaagataaatcagattagcctggatgaaagtggagagcacatgggc
gtgtgttcagaggatggcaaggtgcaggtgtttggactgtattctggagaagaatttcat
gagacttttgactgtcccattaaaatcattgctgtgcacccccatttcgtgaaatccagc
tgcaagcagtttgtgactggagggaagaagttgctgctatttgaacgatcttggatgagc
agatggaagtcttctgttttgcacgaaggggaagggaacataaggagtgtgaagtggaga
ggccatctgattgcttgggccaataatatgggtgtgaagatttttgacatcacctcaaag
cagagaatcaccaatgtgccccgggatgatataagtcttcgcccagatatgtatccctgc
agcctctgctggaaggacagcgtgacgctgattattggctgggggacttctgtcaagatc
tgctcagtgaaggaacggcatgccagtgaaatgcgggacttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattctacattagtggacttgcacctctctgtgaccag
ctggttgttctttcctatgtgaaggaggtttcagaaaaaacggaaagagaatactgtgcc
aggccacgactagatatcatccagccgctctctgaaacttgtgaagagatctcttctgac
gctctgacagtgagaggctttcaggagaatgagtgcagagattatcatttagagtactct
gaaggggaatcgctcttttacatcgtgagtccaagagacatcgtagtagccaaggaacga
gaccaagatgaccacatcgactggctccttgaaaagaagaaatacgaggaagctttgatg
gcagccgaaatcagccagaagaacattaaaagacataagattctagatattggcctggca
tatataaaccacctggtggaaaaaggagactatgacatagcagctcgcaaatgccagaaa
attcttgggaaaaatacggcactctgggaatgtgaagtttataaatttaaagaaattggg
cagcttaaggctattagtccttacttgccaagaggagatccaattctgaaaccactcatc
tatgaaatgatcctgcatgaatttttggaaagtgattatgagggctttgccactctgatc
cgagaatggcctggagatctgtacaacaattcagtaattgtgcaagcagttcgggatcac
ctgaagaaggatagtcagaatagaaccttactcaaaaccctggctgaactgtacacctat
gacaaaaactatggcaatgctctggaaatatacttaacattaagacacaaggatgttttc
cagttgatccacaaacataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattctgagattaaaaaagtagtggaagaactggaagatagaccagagttgcag
catgtgtatctgcataagcttttcaagagagaccatcataaggggcagcgctaccatgaa
aaacagattagcctttatgctgaatatgatcgaccaaacttacttccctttctccgagat
agtacccattgcccacttgaaaaggctcttgagatctgtcaacagagaaacttcgtagaa
gagaccgtttatcttcttagccgaatgggtaatagccgaagtgccctgaagatgatcatg
gaggaattacatgatgttgataaagcaattgaatttgccaaggagcaagatgatggagaa
ctctgggaagatctgattttatattccatcgacaaaccaccatttattactggcttgttg
aacaacattggcacgcatgtggacccaatcctactgattcaccgtattaaggaagggatg
gagattcccaatttgagagattccttggtgaagattctgcaagactacaatttacaaatt
ctacttcgtgaaggttgcaagaagattctcgtagcggactctttgtccttactgaagaaa
atgcaccgaactcaaatgaaaggcgttctggttgatgaggagaacatctgtgaatcgtgc
ctttctcctattctcccatcagatgcagctaagcccttcagcgtggtggtcttccactgc
cgccacatgttccacaaggagtgcctgcccgtgcccagcatgagctcccctgcgcagttc
tgcggcatctgcagtgccaagcaccgcggaccaggaagtgccattttggagatgaagaag
tag

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