Canis lupus familiaris (dog): 475970
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Entry
475970 CDS
T01007
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
475970 (SSRP1)
03036 Chromosome and associated proteins [BR:
cfa03036
]
475970 (SSRP1)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
475970 (SSRP1)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
475970 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
bPH_2
Motif
Other DBs
NCBI-GeneID:
475970
NCBI-ProteinID:
XP_038310117
Ensembl:
ENSCAFG00000007947
VGNC:
46841
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All DBs
Position
18:38347858..38357705
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AA seq
712 aa
AA seq
DB search
MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEKKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEE
TDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVE
VKKGKDPNAPKRPMSAYMLWLNASREKIKADHPGISITDLSKKAGEIWKGMSKEKKEEWD
RKAEDARREYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLS
ESFKSKEFVSSDESSSGENKSKKKRRRSEDSEEEELASTPPSSEDSASGSDE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacactggagttcaacgacgtctatcaggaggtgaaaggctccatgaacgat
ggtcggctaaggttgagccgccagggtatcatcttcaagaacagtaagacgggcaaagtg
gataacatccaggctggggagctgacggaaggcatctggcgccgagtcgccctgggccat
ggacttaaactgcttacaaagaatggccacgtctacaagtatgacggcttccgagaatcg
gagtttgagaaactctctgatttcttcaaaactcactatcgccttgagctgatggagaag
gacctctgtgtgaaaggctggaactggggaactgtgaagtttggtggacagctgctctcc
tttgacatcggtgaccagccggtcttcgagataccgctcagcaatgtgtcccagtgcacc
actggcaagaatgaggtgacgctggaattccaccagaatgatgacgctgaggtgtctctc
atggaagtgcgcttctatgtgcctcccacccaggaggatggcgtggacccagttgaggcc
tttgcccagaatgtgctgtctaaggcggatgtgatccaggccactggagacgccatttgc
atcttccgggagcttcagtgtctgactccccgaggccgttacgacattcggatctacccc
acctttctgcacttgcatggcaagacctttgactacaagatcccctataccacggtgctg
cgtctctttttgctgccccacaaagaccagcgccagatgttctttgtgatcagcctagat
cctcccatcaagcagggccaaacccgttaccacttcttgatacttctcttctccaaggat
gaggacatttccttgactctcaacatgaacgaggaagaagtggagaaacgctttgagggg
cggctcactaagaacatgtcgggatcgctatacgagatggtcagccgggtcatgaaggcg
ctggtcaaccgcaagatcacagtgccaggcaacttccaagggcactcgggggcccagtgt
atcacctgctcctacaaggcgagctcgggactgctctaccccctggagcggggcttcatc
tacgttcacaagccacctgtgcacatccgcttcgatgagatctcctttgtcaactttgcc
cgtggtaccaccaccactcgttcctttgactttgaaatcgagaccaagcagggcacccag
tataccttcagtagcattgagagggaggagtatgggaagctgtttgattttgtcaacgcc
aaaaaactcaacatcaaaaaccgaggattaaaagagaaaaaagagggcatgaacccaagc
tacgatgaatacgccgactctgatgaggaccagcacgatgcctacttggagcggatgaag
gaggagggcaagatccgggaagagaatgccaacgacagcagcgatgactcaggagaagaa
accgatgagtcattcaatccaggtgaagaggaggaagacgtggcagaggagtttgacagc
aacgcctcagccagctcctctagtaatgagggtgacagtgaccgtgatgagaagaaacgg
aagcagcttaaaaaggccaagatggccaaggaccgcaagagccgcaagaagcctgtggag
gtgaagaagggcaaagaccccaatgcccccaagaggccgatgtctgcctacatgctatgg
ctcaatgccagccgagagaagatcaaggccgaccatcccggcatcagcatcactgatctt
tccaagaaggcaggcgagatctggaagggaatgtccaaagagaagaaggaggagtgggat
cgcaaagctgaggacgccaggagggaatatgaaaaagccatgaaagaatatgaagggggc
cggggtgagtcttccaagagggacaagtcaaagaaaaagaagaaagtaaaggtgaagatg
gaaaagaaatcaacgccctcgaggggctcatcatccaagtcctcatcaaggcagctaagt
gagagcttcaagagcaaagagtttgtgtccagtgatgagagttcttccggagagaacaag
agcaaaaagaagagaaggcggagtgaggactctgaagaagaggagctggccagcaccccc
cccagctcagaagactcggcatcaggatctgatgagtag
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