Canis lupus familiaris (dog): 476031
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Entry
476031 CDS
T01007
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X12
KO
K13095
splicing factor 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
476031 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
476031 (SF1)
Spliceosome [BR:
cfa03041
]
Complex A
Other components
Complex A specific factors
476031 (SF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
476031
NCBI-ProteinID:
XP_003432373
Ensembl:
ENSCAFG00000014239
VGNC:
46066
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All DBs
Position
18:50987426..51001160
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AA seq
548 aa
AA seq
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MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQRSLPAAAMARAMR
VRTFRAHW
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagcgaacgccacgccgctggacttcccaagtaagaagcggaagaggagc
cgctggaaccaagatacaatggaacagaagacagtgattccaggaatgcctacagtcatc
ccccctggacttactcgggaacaagaaagagcttatatagtgcaactgcagatagaagac
ctgactcgtaaactgcgcacaggagacctgggcatcccccctaaccctgaggacaggtcc
ccttcccctgagcccatctacaatagcgaggggaagcggcttaacacccgcgagttccgc
acccgcaaaaagcttgaagaggagcggcacaacctcatcacggaaatggttgccctcaac
cctgattttaagccacctgcagattacaaacctccagcaacacgggtgagcgataaagtc
atgattccacaagatgagtatcctgaaatcaactttgtggggctgctgattgggcccaga
gggaacaccttgaagaacatagagaaagagtgtaatgccaagatcatgatccgagggaaa
gggtctgtcaaagaagggaaagttggccgcaaagatggccagatgctgcctggagaagat
gagccgcttcatgccctggttactgctaacaccatggagaatgtgaagaaagctgtggaa
cagataagaaacattctgaagcagggtattgagacccctgaggaccagaatgatctacgg
aagatgcagcttcgggagttggctcgtttaaatgggacccttcgggaagatgataacagg
atcttgagaccctggcagagctcagagacacgcagcattaccaataccacagtgtgtacc
aagtgtggaggggctggccacattgcatctgattgcaaattccaaaggcctggtgacccc
cagtcagctcaggataaagcacggatggataaagagtatctgtcccttatggctgaactg
ggcgaagcaccggtgccagcatctgtgggttccacatctgggcccgccaccacgcccctg
gccagtgcacctcggcctgctgctcctgccaacaacccacctccaccgtctctcatgtcc
actacccagagccgcccaccgtggatgaattctggcccttcagagagtcggccctaccat
ggcatgcatggaggtggtcctggtgggcctggaggtggcccccacagcttcccacaccca
ttacccagcctgacaggtgggcatggtggacatcccatgcagcacaaccctaacggaccc
ccacccccttggatgcagccaccaccaccaccgatgaaccagggcccacacccacctggg
catcatggccctcctccaatggatcagtacctgggaagtacgcctgtgggctctggggtc
tatcgcctgcatcaaggaaaaggtatgatgccaccgccgcctatgggcatgatgccaccg
ccgccgccgcctcccagtgggcagcccccgccccctccctctggtcctcttcccccatgg
cagcagcagcagcagcagcctccgccaccccctccgcccagcagcagtatggcttccagt
acccccttgccatggcagcaaagatccctccccgcggcggcgatggcccgagccatgaga
gtgaggactttccgcgcccattggtga
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