KEGG   Canis lupus familiaris (dog): 476067
Entry
476067            CDS       T01007                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03420  Nucleotide excision repair
cfa04120  Ubiquitin mediated proteolysis
cfa05161  Hepatitis B
cfa05170  Human immunodeficiency virus 1 infection
cfa05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    476067 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    476067 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    476067 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    476067 (DDB1)
   05161 Hepatitis B
    476067 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cfa04121]
    476067 (DDB1)
   03400 DNA repair and recombination proteins [BR:cfa03400]
    476067 (DDB1)
Ubiquitin system [BR:cfa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     476067 (DDB1)
DNA repair and recombination proteins [BR:cfa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      476067 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      476067 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 476067
NCBI-ProteinID: XP_533275
Ensembl: ENSCAFG00000016264
VGNC: 39829
UniProt: A0A8C0QFD6 A0A8I3NKI4
LinkDB
Position
18:53637465..53670146
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtgacggcccagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacttcagccgaggacttgaacctgttgatcgccaaaaacacgaggttggag
atctatgtggtcactgctgaggggcttcggcccgtcaaggaggtgggcatgtatgggaag
attgcagtcatggagctcttcaggcccaagggggagagcaaggacctactctttatcctg
acagctaaatacaatgcctgcatcctggaatataagcagagtggcgagagcattgatatc
ataacgcgagcccatggcaatgtccaggaccgtattggccgcccctcagagactggcatt
attggcatcattgaccctgagtgccggatgattggcctgcgactctatgatggccttttc
aaggttattccgctagaccgggacaataaagagctcaaggcctttaacatccgcctcgag
gagctgcatgtcatcgatgtcaagttcctatatggttgccaagcacctaccatctgcttt
gtctaccaggaccctcaggggcggcatgtgaaaacttacgaggtgtctctccgagagaag
gagttcaataagggcccttggaaacaggaaaatgtagaagctgaagcttccatggtgatt
gcagtcccagagcccttcggaggggccatcatcattggacaggaatcaatcacctatcac
aatggtgacaaatacctggcaattgctcctcctatcatcaagcaaagcacaattgtgtgt
cacaatcgtgtggaccccaatggttcccgctatctgctgggagacatggagggaaggctc
ttcatgctgcttttggagaaggaggaacagatggatggcactgtcaccctcaaagatctc
cgtgtggagctcctcggagagacttctattgctgaatgcttgacatacctcgataatggt
gttgtgtttgttgggtctcgccttggggactcccagcttgtgaagctcaatgttgacagc
aatgaacaaggctcctatgtagtggccatggaaacctttaccaatttaggacccattgtg
gatatgtgtgtggtggacctggagaggcagggacagggacagctggttacttgctctggg
gctttcaaggaaggttccttgcggatcatccggaatggaatcggaatccatgagcatgcc
agcattgacttaccaggcatcaaaggtctgtggccactgcggtctgacccaaaccgggag
actgatgacactttggtgctctcttttgtgggccagacaagagtcctcatgttaaacgga
gaggaagtggaagaaaccgaactgatgggttttgtggatgatcagcagactttcttctgt
ggcaacgtggctcatcaacaactcatccagatcacttcagcatctgtgagattggtctct
caggaacccaaagctctggtcagtgagtggaaggagcctcagggcaagaacatcagtgtg
gcctcctgcaacagcagccaggtggtagtagctgtgggaagggccctctactacttgcag
atccatcctcaggagctccgacagatcagccacacagagatggaacatgaagtggcctgc
ttggacatcacgccgctgggagacagcaatgggctgtcccctctttgtgccattggcctg
tggactgacatctctgcacgtatcttgaagctgccgtcttttgagctgctgcacaaagag
atgctgggtggagagatcattcctcgctccatcctgatgaccacttttgagagtagccac
tatctcctttgtgccttgggagatggggcacttttctacttcgggctcaacattgagaca
ggcctgttgagcgaccgtaagaaggtgactctgggcacacagcccacggtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaagttggtcttttccaatgtcaacctcaaggaggtcaactacatgtgt
cccctcaactctgatgggtatcctgacagcctggcactggccaacaacagcactctcacc
attggcaccatcgacgagatccagaaactgcacatccgcaccgttcccctctatgagtct
ccaaggaagatctgctatcaggaagtgtcccagtgctttggggtcctctccagccggatc
gaagtccaagacacaagtggcggcacaacggccctgaggcccagtgctagcacccaggcc
ctgtccagcagcgttagctccagcaagctattctccagcagcacagcaccgcatgagacc
tcctttggagaagaggtggaagtgcacaatctcctcatcattgaccagcatacctttgaa
gtgcttcatgcccaccagtttctgcagaatgagtatgctctaagcctggtctcctgcaag
ctgggcaaagaccccaacacgtacttcattgtgggcacagccatggtgtatcccgaagag
gcagagcccaagcaaggtcgaattgtggtctttcagtattctgacggaaagctacagact
gtggccgagaaggaagtgaaaggagctgtgtactctatggtggaatttaatgggaagctg
ttagccagcatcaacagcacggttcggctttatgagtggacaacagaaaaggagcttcgc
actgagtgcaatcattacaacaatatcatggccctctacctgaagaccaagggcgacttc
atcctggtgggtgacctgatgcgatcggtgctgctgcttgcctacaagcccatggagggg
aactttgaagagattgctcgagacttcaatcccaactggatgagtgctgttgaaatcttg
gatgatgacaatttcctgggggctgaaaatgcctttaacttgtttgtgtgtcagaaggat
agtgctgccaccactgatgaggagcggcaacacctccaggaggtcggtctcttccatctg
ggtgaatttgtcaacgtcttttgccatggctctctggtcatgcagaatctgggcgagact
tccactcctacacagggctcggtgctctttggcacagtcaatggcatgattgggctggtg
acctcgctgtcagagagctggtacaacctcctgttggatatgcagaatcgactcaataaa
gtcatcaagagtgtgggcaagattgagcactctttctggagatcctttcatactgagcga
aaaacagaaccagccacgggcttcattgatggagacttgattgagagtttcctggacatc
agccggcccaagatgcaggaggttgtggcaaaccttcagtatgatgatggcagcgggatg
aagcgagaggccactgcggacgacctgatcaaagttgtggaggagctgacacggatccat
tag

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