Canis lupus familiaris (dog): 476211
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Entry
476211 CDS
T01007
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X4
KO
K14416
elongation factor 1 alpha-like protein
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03015
mRNA surveillance pathway
cfa05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
476211 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
476211 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
476211 (HBS1L)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
476211 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
AAA_29
Motif
Other DBs
NCBI-GeneID:
476211
NCBI-ProteinID:
XP_005615488
Ensembl:
ENSCAFG00000000226
VGNC:
41612
UniProt:
A0A8C0MAG2
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All DBs
Position
1:complement(28584758..28671733)
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AA seq
577 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTGKSIDSQSSRSESEIVPKVAKMTV
SGKKQTMGFEVPGVTEENGHSFHTLQKEHLSEETSIASSDVLDTVSKSVLPSHTIQTSEE
QNSPSVPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNV
NKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPG
HKDFIPNMITGAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNK
MDQVNWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSGELTKWYKG
LCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNE
TCTAKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKSCTRFRARILI
FNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQT
QRPVALELYKDFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtcgaggatgattattgtatttcgccatcaacaggaaaatcaata
gattctcagtcatctcgaagtgaatctgaaattgtgccaaaagttgccaaaatgactgtg
tctggaaagaagcaaactatgggattcgaagtgcctggagtaactgaagaaaatggtcat
agtttccacacacttcaaaaagaacatcttagtgaagaaaccagcattgcttcttctgat
gttcttgacactgtttctaaatcagttctcccatcccacaccattcaaacatcagaagag
cagaattcaccatcagtaccggtgaagaaatctggcaagctgaggcagcaaatagatgtc
aaagcggaactggagaagcggcaaggagggaagcagctcctcaacttggtggtcatcggt
catgttgatgctgggaaaagtactctgatgggccatatgctttatcttctgggtaatgta
aacaaaagaactatgcataagtatgaacaagagtctaaaaaggctggcaaagcttcgttt
gcatatgcatgggtcttggatgagactggcgaagaaagggaaaggggagtaacaatggat
gttggtatgacaaagtttgagaccacaaccaaagttattacattaatggatgctccaggc
cataaggatttcattccaaatatgattacaggagcagcccaggcggatgtagccatttta
gttgtagacgccagcaggggagagtttgaagctggatttgagactgggggacagactcga
gaacacggcctcttggttcgttctcttggagtaacacagcttgcagttgcggtcaataag
atggatcaggttaattggcaacaagaaaggtttcaagagattactggaaaacttgggcac
tttcttaagcaagcaggttttaaggaaagtgatgtggcttttatccctacaagtggtctc
agtggtgaaaatctaatcacaagatctcaatcaggtgaactcacaaaatggtataaagga
ctatgtttattagaacaaattgattccttcaagcctcctcagagatctattgataagcct
tttagattatgtgtatctgatgttttcaaagatcaaggatctggattttgtgtaactggt
aaaattgaagctggttatatccagactggtgaccgactactagcaatgcctcctaacgaa
acttgtactgcaaaaggaatcactctgcacgatgaaccggtcgactgggcggcagcaggt
gatcatgttagtcttacgttagttgggatggatatcatcaagatcaatgttggttgcata
ttttgtggccccaaagagcccattaaatcttgcactcgtttcagagctcgaatcctcatc
tttaatattgaaattcctattactaaaggatttcctgtgctgttacactaccagactgtc
agtgaacctgctgttattaaacgattgattagtgtcttaaacaaaagcacaggtgaagtg
acaaagaagaagccaaaattattgaccaaaggccagaatgccttggtggagctgcagaca
caaaggccagttgctctggagctgtacaaagacttcaaagagctggggaggttcatgctg
cgctacagtggttctacgattgcggcaggcgtggtcacggagataaaagaatga
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