Canis lupus familiaris (dog): 476319
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Entry
476319 CDS
T01007
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X4
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
476319 (VPS13A)
Membrane trafficking [BR:
cfa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
476319 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_M
VPS13_N
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
476319
NCBI-ProteinID:
XP_022276645
Ensembl:
ENSCAFG00000001617
VGNC:
48274
LinkDB
All DBs
Position
1:complement(81654790..81889759)
Genome browser
AA seq
2892 aa
AA seq
DB search
MVLSLTILFQKVMILYFSVMELLESVDMMTQNLPYRKFKPDVPLHYHAREWWSYAIHGIL
EVNVCPRLRMWSWKHIREHRQKMKKYKDLYKKKITTKKPAGEILIALEELEKTLDVFNIT
ISRQQAEVEAKKAGYRIFKEGAKDSEENKGWFSWLWTWSEPRSKEQPDVKPGILEEMLTP
EEKTLLYEAIGYSETAVDPTLPKTFEAMKLFVHLKSMSIVLREKQETPELLDIVVEEFST
LIVQRPGAQAIKFETKIDSFHVTGLPDNSTKPRLLSSLDDATSLFQIIFEINPLDETVAQ
RCIIEAEPLEMIYDARTVNSIVEFFRPPKEVNLAQLTSVTLTKLEEFRDKTATGLLYIIE
TQKVLDLRINLKASYVIIPQDGIFSPTSNLLLLDLGHLKVTSKSRLELPDMKQGGARLEE
IMHRAYDSFDVQLTSIQLLYSTVGDNWREARKLNVSTQHILVPMHFNVELSKAMVFMDIR
MPKFKIFGKLPLISLRISDKKLQGILELIESIPKPTPAPEAYAPAKPFQIQRSTSLGTSQ
ISQKMLPFLELPCVEDDSEEEYFDAPCSPLEEPLQSPTGVQSYQQKKIQKPDCSKNMIQY
KIRFEVPEVLIQFYHLVGDCELPVVEIDVLGLGTDVELRTFDLKANAFLKEFCLKCPEYF
DKNKKPIYLVTTLDNTMEDLLTLEYVKAEKNLPNLKSTYNNAVQLIKVNFSSLDIHLHTE
ALLNTINYFNNILPQLEEKSAPVSVAETEDKGEVIKKMPLKLSKNEDIINLQILAELSCL
QIFIQDQKRNISEIKIEGLDSEIIMRPAATEINAKLRNIIVLDSDKTAVYKKAVYITGKE
VFSFKMISFVDATAGSAYTDMNVVDVQVNLTVGCIEVVFVTKFLYSILAFIDNFQAAKQA
LAEATVQAAGMAATGVKELAQRSSRMALDVNIKAPVVVIPQSPVSENVFVADFGLITMTN
TFHVITESQSNPPPVIDLITIRLSEMRLYRTQFINDTYQKVLDLLLPLNLEVIVERNLSW
EWYQEVPCFNVNAQLKPMEFILSQEDLTTIFKTLHGNIWYEEGDGASPGGVKDQSSVNSG
VTNASHHLEGTTVVTAAVVEVHSQASQVKTTLNMSFRTDYLTMVLYSPGLEKTSFTDVRD
PSLKLAEFKLENIISTAKMYTDDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKK
DMMDVKYRRVRDGWVADLVLQETYICASVEFLLTVANVFLEAYTTGTAVETSVQTWTAKE
EVPVQESVKWEMNIIIKNPEIVFVADMTRSDAPALVITTQCEICWKGDLENNTMTAAIKD
LQVRACPFLPVKRKGKITTVLQPCDLFYQATQVRTDPQVMDISVKSLTLKVSPVIINTVI
TITSALYTSKDTIPQETTSTAYLWEKKDTKNLKMWFLEEPNEVENKAPTTELILKGEIIR
MNIDSIFIVLEAGIGHRTVPMLLAKSRFSGEGKNWSSLINLYCQLELEVHYYNEMFGVWE
PLLEPLEIDQTEDFRPWNLGIKMKKKTKKAIVESDTEEENYKVPEYKTVISFHSKDQLNI
TLSKCGLVMLNNLVKAFTEAATGTSTAFIRDLAPFMILNSLGLTVSVSPSDSFSVLNFPL
AKSYVLKNEESLSMDYVGTKDNDHFNAMTSLSSKLFFILLTPANHSTADKIPLTKVGRRL
YTVRHRESGVERSIVCQVDGVEGSKKVTIRSPVQIKNHFSVPLSVYEGDILLGTASPGNE
FNIPLTSYRSPLSLRPEDEDYQACERIDFEEIIKNDGTFLKKKCRSINAAKKPFIINVVP
EKDNLASLSVYSEDGWDLPYIMHLWPPILLRNLLPYKIAYYIEGTEHKVYTLNEGHSAHI
CTVQLDKARLHLKLLDYLNHDWKSEYHIKPNQQDISFINFTCVTEIEKTDLDIAIHVTYN
TGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMV
TDSELSDQFSIDTVGSHGAVKCKGLKMDYQVGVTIDLSSFNITRIVTFTPFYMIENKSKY
HISVTEQGNDKWLSLDLEQCIPFWPEDASNALLIQVERHQGPPKKIHFNKQENCILLRLD
NELGGIIAEVNLAEHSTVITFSDYHDGAATFLLINHTKSDIVQYNQSSLSEIEDSLPPGK
AVFYTWADPMGSRKLKWRCGKSHGEVTQKDDMMTPINSGKKTIYLVSFFEGLQRIILFTE
DPRVFKATYESEKAELAEQEIVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKK
ARWKPMSIKHTEKLEKEFKEYTESSPSEDKVIELDTNIPVRFTPSGTNMKILQPHVIAIR
RNYLPALKVEYSTSAHQSSFRIQIYRIQIQNQIQGAIFPFVFYPIKPPKSVTMDSAPKPF
TDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFVYALAELMTEAEVSEKNEVELFHK
DIEAFQEEYKTASLVDSSQVSLYEYFHISPIKLHLSVSLSSGREEAKDSEKHEGLVAIHS
LNLLLKSIGATLTDAQDVVFKLAFFELNYQFHTASELQSEVIRHYSKQAIKQMYVLILGL
EVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASK
ITNAMAKGVAAMTMDEDYQQKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPI
KGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFF
NEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTF
GQLTCEWQYSFDEFTKEPFIVHGRRLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILT
KLEEAREPSPRF
NT seq
8679 nt
NT seq
+upstream
nt +downstream
nt
atggtattgtcactgacaatactgttccagaaggttatgattttgtatttcagtgttatg
gagcttcttgaatcagttgatatgatgacgcaaaatctgccatacaggaaattcaaacct
gatgtacctcttcactatcatgccagagaatggtggtcttatgctatacatggtattctt
gaagtaaatgtctgcccccggttacggatgtggtcatggaagcatattagagaacacagg
caaaagatgaagaagtataaagacctgtataaaaaaaagataacaactaagaagccagct
ggtgaaattctcatcgctttggaggagttggaaaagaccttggatgtatttaatataact
atatcaagacaacaggcagaagttgaggcaaagaaagctggatataggattttcaaagaa
ggtgcaaaagattcagaggaaaataaaggatggtttagttggctgtggacttggtcagaa
ccaagaagtaaagaacaaccagatgttaaacctggaattcttgaagagatgttgacacct
gaagaaaaaactttactctatgaagcaattggctatagtgaaacagcagttgatcccacc
ttgccaaaaacatttgaagccatgaagctttttgttcacttgaaaagcatgtctattgtt
ctaagagaaaaacaagagacacctgagctgttggatattgtagtagaagaatttagcact
ttgattgtgcaaagaccaggagcacaagccattaaatttgaaaccaaaattgattcattt
catgttactggcttgccagataattcaacaaaacctcgcctcctatcttcattggatgat
gctacttcactcttccaaattatatttgagataaatccgttagatgaaactgttgctcaa
aggtgtatcatagaagctgaacctttagaaatgatatatgatgcaagaacagtgaatagt
atagtggaattcttcaggcctccaaaagaggtaaatctagcacagctcacgtcagtgact
ttgacaaaacttgaagaatttcgtgacaagacagcaacaggactgctgtacattattgaa
acacagaaagttcttgatctcagaattaatctgaaggcttcctatgttattatcccacaa
gatggaatttttagtcctacatcaaatctgcttcttttagatcttggtcatctaaaggtg
acaagtaaaagtcgtttggaattgccagatatgaaacaaggaggagccaggcttgaagag
atcatgcatagagcttatgattcctttgacgttcagcttacaagcatacagctgctttac
agcacagttggtgataattggagagaagcgcgaaaattgaatgtatctacacagcatatt
ttggtacctatgcacttcaatgtggaactctctaaggccatggttttcatggatataagg
atgcccaaattcaagatttttggaaagttaccactgatttctttacgaatctcagataaa
aaactgcaaggaattttggaattgattgaaagcattccgaaacccacacctgcacctgaa
gcatatgcccctgccaaaccatttcagattcaaaggtccacttctttgggaacatcacag
atttcacagaaaatgcttcctttcttggagcttccatgtgttgaagatgattctgaagaa
gaatattttgatgcaccttgtagtcctttggaagagcctcttcagtctcccactggagtt
cagagttatcagcagaaaaagattcaaaagccagattgttcaaaaaatatgattcagtat
aaaataagatttgaagtgccagaggttttgattcagttttatcaccttgttggagattgt
gaattacctgtggtagaaattgatgttttaggattgggcacagatgttgaacttagaaca
tttgatttgaaagcaaatgcctttttgaaagagttctgcctaaaatgcccagaatacttt
gataaaaacaagaaaccaatttatttggttacaacactggataatacgatggaagatctg
ctaacattggaatatgtgaaggctgaaaagaatctgcctaacttgaaaagtacttataac
aatgctgtacaactgattaaggtgaatttttcctctttggatattcatttacataccgaa
gcacttctgaatacaataaattattttaataatatacttccacagttggaagaaaaatca
gccccagtgtctgttgcagagactgaagacaaaggagaggtcattaaaaaaatgccttta
aaactatcgaagaatgaagatattattaacttgcaaattttagcagaattatcttgttta
cagatctttattcaagatcagaaacgtaacatttctgaaattaagattgaagggcttgat
tctgagatcattatgaggcctgcagcaactgaaataaatgcaaaactaaggaatatcatt
gttttggattctgataaaacagctgtatacaaaaaggctgtttacatcactggaaaagaa
gtgtttagcttcaaaatgatttcttttgtggatgcaactgctggttctgcatacacagat
atgaatgtggttgatgttcaagttaacttaactgttggttgcattgaagtagtttttgtc
acaaaatttctatactctatattggcttttatagataattttcaagcggctaaacaggct
ttggctgaggctactgttcaagcagcaggaatggctgctactggtgtaaaagaattggca
cagaggagttctagaatggcattggatgttaacatcaaagccccagtggtagtcatccca
cagtctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgacaaac
acattccatgtaataacagagagccagagcaaccccccaccagttattgatttgataaca
ataaggctgagtgaaatgcgactatacaggactcaatttattaatgatacataccagaaa
gtactagatctgctactgccattaaatcttgaggtgattgttgagcggaatttatcttgg
gagtggtaccaggaagttccttgttttaacgtaaatgctcagttaaagcccatggagttc
attcttagtcaagaagatttaacaactatttttaaaacattacatggcaatatatggtac
gaagaaggtgatggtgcctcacctggaggagtaaaagatcagagtagtgttaatagtgga
gttactaatgcttcacaccatttagaaggaacaactgtagtgaccgctgctgtggtagaa
gtacattcacaggcctctcaagttaagacaacactgaatatgagcttcagaacggactat
ctcaccatggtactgtatagtccaggtcttgaaaagacttcctttacagatgttcgtgat
ccttctctgaaacttgctgaatttaagttggagaatatcataagcactgcaaaaatgtat
acagatgactcaacattttcttccttctcattaaaaaattgtattttagatgataaaagg
cctcatgtcaagaaggcaactcctagaatgataggactgacagttggttttgacaaaaag
gacatgatggatgtaaagtatagaagagtcagagatggttgggtggctgatttagtcctt
caagaaacgtatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttctt
gaggcctacaccacaggcactgctgtagaaaccagtgttcaaacatggactgctaaggaa
gaagtacctgtacaagaatcagtaaagtgggaaatgaatattattattaaaaatcctgaa
attgtgtttgtggctgatatgacaagaagtgatgctcctgccttagtcattacaacacag
tgtgaaatttgttggaaaggtgaccttgagaataatacaatgactgctgccattaaagat
cttcaagtgagagcctgcccatttcttccagtcaagagaaaaggcaaaatcactactgtt
ttgcagccctgtgatttgttctatcaagctactcaagtacgtacagatccacaagtgatg
gatatatcagtaaaatccctcacactaaaggtttcaccagtcatcataaatactgtgatt
accataacatcagcactttatacatccaaggacaccatcccacaggaaactacttctaca
gcatatttatgggagaagaaggatacaaagaatttaaaaatgtggtttcttgaagaacca
aatgaagttgaaaacaaagctcccacaactgaattgatacttaaaggagagatcataaga
atgaacattgattctatctttatagttcttgaggctggaattggtcatagaacagtgcct
atgctgctggcaaagtcacgtttttcaggggaaggcaaaaactggagttccttgataaat
ctctactgtcagcttgaactagaagtgcattattacaatgaaatgttcggtgtatgggag
cctttgcttgaacccttagaaattgatcagactgaggattttagaccatggaatcttgga
atcaagatgaaaaagaaaacaaaaaaggccattgttgagtcagatactgaagaagaaaat
tacaaagtgccagaatataaaaccgttatcagtttccattcaaaagaccaactaaacatt
acattatccaaatgtggccttgtaatgttgaataatttagtcaaggcatttacagaagct
gccactggaacctcaactgcctttatacgggatctagcgccatttatgattttgaattct
cttggacttactgtctctgtttcaccaagtgattcttttagtgtactcaacttcccattg
gcaaaatcatacgtattgaaaaatgaggagagtttaagtatggactacgtgggaactaaa
gacaatgatcatttcaatgcaatgaccagcctaagcagtaaactcttcttcattcttctt
acacctgccaaccactctactgctgataaaattcctttaacaaaagtgggacggcgactg
tacactgtaagacacagagagtctggggttgaaagatcaattgtttgtcaagttgatgga
gtggaaggaagtaagaaggtaacaattcgctccccagtgcagataaaaaatcatttttca
gtcccactttctgtttatgaaggggacattttgttgggaacggcctcacctggaaatgaa
ttcaacataccattaacatcttaccgatcacccctttctctgaggccagaagatgaggac
tatcaagcatgtgaaagaattgactttgaagaaattataaaaaatgatggcacttttcta
aaaaagaaatgtagatctataaatgctgctaaaaaaccatttatcattaatgttgtccca
gaaaaagataatttggcttctctgtccgtgtattcagaagatggttgggatttaccatac
ataatgcatttgtggccacctatcctgcttcgaaatcttcttccttacaaaattgcttac
tatatagagggcactgaacataaagtttatactctaaatgaaggacattcagcccatatt
tgtactgtgcagttggataaagccagactacatttaaaattacttgactatcttaatcat
gattggaaaagtgaatatcatataaaacctaatcagcaagatattagtttcatcaatttt
acctgtgttacagaaatagaaaagactgatttagatattgctatccatgtgacttacaat
actggccagacagttgtggcatttcatagtccttactggatggtcaataaaactggtcga
atgttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaaagcca
gttctcttttcttttcaaccaaagcacttttttaataataataaggttcagctgatggta
actgatagtgaattgtcagatcagttttcgattgatactgttggtagtcatggagctgtt
aaatgtaaaggtctgaaaatggactatcaagttggtgtcactatagacctcagcagtttt
aacattaccaggattgtgacatttacccctttttatatgatagaaaacaaaagcaagtat
catatatcagtaactgaacagggaaatgataagtggctctctcttgatttggagcagtgt
atccccttttggcctgaggatgcttctaatgcacttcttattcaagttgaaagacatcaa
ggccctcccaaaaagatacattttaacaagcaagagaattgtattttattgcgcctggat
aatgagcttggaggtattatagcagaagttaatttggctgaacattctacagttattaca
ttttcagattatcatgatggagcagctacattcctattaataaatcacaccaagagtgac
attgttcagtacaatcaaagttctctcagtgaaatagaagattccctccctcctggaaaa
gcagtattttatacatgggctgatccaatgggctctagaaagctgaagtggagatgtgga
aaaagccatggtgaagtaacacaaaaggatgatatgatgacacctataaattcggggaaa
aagaccatttatttagtttcattctttgaaggcttacaacgcattattttattcactgaa
gatccaagggtatttaaagcaacatatgaaagtgagaaagcagagttagcggagcaagaa
attgtgttggccttacaagatgttggaatttctctcgtcaacaattacacaaagcaagaa
gtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaag
gcaagatggaagccaatgagtataaagcacactgagaagttagagaaagaatttaaggaa
tatactgaatcttcaccttcagaagataaggttattgaattggacactaacattccggtt
cgcttcacacctagtggtactaatatgaaaattctgcaaccacatgtaatagctatacga
agaaattatcttccagcattaaaagtagaatatagcacatctgcacatcagtcatcattt
agaattcaaatttacagaatacagatccaaaaccagattcaaggtgctatatttccattt
gtattttatccaattaaacctcccaagtcagtcaccatggattcagctccaaagcccttt
acagatgtcagtattgtcatgagatctgctgggcattcccagatatcacgtattaagtac
ttcaaagtgttgatccaagaaatggatctcagattagatcttgggtttgtttatgcttta
gcagaacttatgacagaagctgaagtgagtgaaaaaaatgaggttgaactttttcataaa
gatatagaagctttccaagaagaatataaaacagcttcattagtagattcatcacaagtt
agtctctatgaatatttccatatatctcctatcaagttgcatttaagtgtttcactgagt
tcgggcagagaagaagccaaagattcagaaaaacatgaaggactggtggctattcattct
ttaaatcttttgctgaagagtatcggtgccactcttacagacgcccaagatgtagttttt
aagcttgcattttttgaactcaactatcagttccatacagcttctgaactacagtctgaa
gtaataagacactattcaaaacaggccattaagcaaatgtatgtactcattcttggactt
gaagttttgggaaatccctttggcttgattagagaattttctgaaggtgtggaagcattt
ttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggaggggatggcg
ctaggactgaaggcgctggttggtggagctgtcggtggattagctggtgctgcctccaaa
atcactaatgctatggctaaaggggtggcagctatgactatggatgaagactaccaacag
aagagaagagaagcaatgaataagcaaccagctggtcttagagaaggcatcactcgtgga
ggaaaaggcttagtttctggttttgtaagtggcataacaggaattgttacaaaaccaatc
aaaggagctcaaaaagaaggagcagctggtttctttaaaggtgttgggaaaggtttagtt
ggagcagtggcaaggccaactggaggcatcatagacatggccagcagtacatttcaggga
ataaaaagagctacagagacttctgatgaagtggagagccttcgaccccctcgattcttt
aatgaggatggagttatcagaccttacaggttgagggatgggactggaaaccagatgtta
caggtcatggaaaatggaagatttgcaaaatacaagtattttacccatgtcatgatcaat
aaaacagatatgttaatgataactaaaagtggtgtattgtttgtaacaaaaggaacattt
ggacagcttacatgtgagtggcagtatagttttgatgaatttaccaaagagccattcatt
gttcatgggagaagattacgcattgaagcaaaggaacgggtgaagtctgtgtttcatgcc
aaagagtttggaaaaataattaacttcaagaccccagaggacgctaggtggatcctcaca
aaactagaagaagcaagagaaccttccccgagattctga
DBGET
integrated database retrieval system
