Canis lupus familiaris (dog): 476327
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Entry
476327 CDS
T01007
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X2
KO
K22803
structural maintenance of chromosomes protein 5
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfa03400
]
476327 (SMC5)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
476327 (SMC5)
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Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
FtsK_SpoIIIE
AAA_25
Motif
Other DBs
NCBI-GeneID:
476327
NCBI-ProteinID:
XP_005615931
Ensembl:
ENSCAFG00000001880
VGNC:
46546
UniProt:
A0A8C0NMS1
A0A8I3RQZ4
A0A8P0N4Z8
LinkDB
All DBs
Position
1:complement(87664171..87757137)
Genome browser
AA seq
1091 aa
AA seq
DB search
MATPSRKSSAPGTVASKRALPRDPSSEVPSKRKSSAPPAPPPPPPLPSSRPFVEGSIVRI
VMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKR
GCSKGMVEIELFRTSGNLIITREIDVAKNQSSWFINKKSTTQKVVEEQVAALNIQVGNLC
QFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQLETSCKEKTEYL
EKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEVKLARDRVKEEV
RKLKEGQIPMTRRIEEIERQRHTLEARIKEKATDIKETSQKCKQKQDIIERKDKQIEELQ
QALTVKQNEEHDRQRRISNTRKMIEDLQNELKTTENCENLQPQIDAITNDLRRVQDEKAL
CEGEVIDKRGEKESLEKERKSVGDNIVRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRDK
FKQRVCEPIMLTINMKDNKNAKYIENHISSNDLRAFVFESQEDMEIFLKEIRDNKKLRVN
AVIAPKSSYADKAPSRSLNELKPYGFFSYLRELFDAPDPVMSFLCCHYHIHEVPVGTERT
RERIERVIQETRLKQMYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHLE
EQLKEINRKLQAVEAGLIALCERNKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKLG
SLKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNFVKICTSLHIQKVDLILQNTT
VISEKNKLESDYMAASSQLRITEQHFIELDESRQRLLQKCKELMKRARQVCNLGAEQTVP
QEYQTAFQDLPNTLDEIDALLTEERSRASCFTGLNPTVVEEYTKREEEIEQLTEELKIKK
VELDKYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGI
RIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINER
RVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPNRWNLKAFQRR
RRRITFTQPSQ
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccgagtaggaagtcgtcggccccaggcaccgtggcctccaagagagctctc
ccgagggatccctcgtcggaggtcccgagcaagaggaagagctcggccccgccggcgccg
ccgccgccgccgccgctgccatcgtccaggcctttcgtggagggctctatcgtccgcatc
gtgatggagaacttcttaacgtatgatatctgtgaagtgtctcctggaccccacctgaat
atgattattggagctaatggaacagggaagtctagcatcgtgtgtgccatttgtcttgga
ttagcaggcaaacctgctttcatgggacgagcagataaggttggcttttttgtgaagaga
ggatgttccaagggaatggttgaaattgaattatttagaacttctggaaaccttataatc
acccgcgagattgatgtggcaaaaaatcagtcatcttggttcatcaacaaaaaatctaca
acccagaaagtagtagaagagcaagttgcagccttaaacattcaagtgggcaatctttgc
caatttctacctcaggataaagttggagaatttgctaaactgagtaaaattgaactcctt
gaagctactgagaagtctattggtcctccagaaatgcacagataccattgtgaactcaaa
aacttcagggagaaagaaaaacaactagagacctcgtgcaaagagaaaactgaatatcta
gagaaaatgattcagagaaatgaaagatacaaacaagatgtggagaggttctatgaacgt
aagcgacatttagatttgattgagatgcttgaagctaaaaggccatgggtggaatatgaa
aacgttcgtcaggagtatgaagaagtaaaactagctcgtgaccgagtgaaggaagaggtg
aggaaactgaaggaagggcagatccccatgacacgtcgaattgaagaaattgagaggcag
cggcacactttggaggctcgaatcaaagagaaggcaacagatattaaggagacctctcaa
aaatgtaaacaaaagcaagatattatagaaaggaaagataaacagattgaggaacttcag
caggcattaacggtaaaacagaatgaagaacacgaccggcaaaggaggataagtaacact
cggaagatgatagaagatttgcagaatgaactgaagactacagaaaactgtgagaatctt
cagccccagatcgatgccattacaaatgatttgagacgagttcaagatgaaaaggcatta
tgtgaaggcgaggtgattgataagcgaggagagaaggaaagcctagagaaggagagaaag
agtgtaggtgataatattgtacggtttgacaatcttatgaatcagaaggaagataagttg
agacaaagataccgtgatacatatgatgctgttttgtggctgagaaataaccgggacaaa
tttaagcaaagagtatgtgagcctataatgctcacgatcaatatgaaggataataaaaat
gccaagtatattgaaaatcatatttcatcaaatgacttgagagcttttgtatttgagagt
caagaagatatggagattttcctcaaagagattcgtgacaataaaaaattgagagtaaat
gctgtcattgctcccaagagttcatacgcagacaaagcaccttcaagatctctgaatgag
ctaaaaccatatggatttttctcttacttgcgagaattatttgatgcacctgatcctgtc
atgagcttcctttgctgccattatcatattcatgaagttcctgtaggaactgaaaggacc
agagaaagaattgaacgggtaatacaagaaacccggttaaaacaaatgtatacagcagaa
gaaaagtatgtggtgaaaacttccttctattcgaacaaagttatttctagtaacacatcg
ctaaaagtagcccagtttctcacagtcactgtggatctagagcaaagacgacacttggaa
gaacagctgaaggaaattaatagaaaattgcaagcagtggaagcagggttgattgcccta
tgtgagcgaaacaaacatctagaacacaaagacaatgaacttagacaaaagaagaaggag
cttcttgaaaggaaaaccaagaagagacaactggaacaaaaaattagttccaaactagga
agtttaaaactgatggaacaggatacttgcaaccttgaagaggaagagcgaaaagcaagt
accaaaatcaaagaaataaatgttcaaaaagcaaaacttgttactgaattaacaaacttt
gtaaagatttgtacttctttgcatatacaaaaagttgatttaattcttcaaaatactaca
gtgatctctgagaagaacaaattagaatcagattacatggctgcttcatcacaacttcgt
ataacagagcaacatttcattgagctggatgaaagtcgacagagattattgcagaaatgc
aaggagctgatgaagagagctaggcaagtatgtaacctgggtgcagagcagacagttcct
caagaataccagacagctttccaggatcttccaaacacattggatgaaattgatgcttta
ttaactgaagaaagatcaagagcttcttgcttcacgggactgaatcctacagttgttgaa
gaatacacaaaaagagaagaagaaatagagcaattaactgaggaactaaagataaagaag
gttgaactggataaatacagggaaaacatttcacaggtaaaagaaaggtggcttaatcct
ttaaaagaacttgtagaaaaaattaatgaaaaattcagcaattttttcagttccatgcaa
tgtgctggtgaagttgatctacatacagaaaatgaggaagactatgataaatacggaatt
cgaattcgagtcaaatttcgcagcagtacgcagctgcacgaattaaccccacaccatcag
agtggaggtgaaagaagtgtttccaccatgttgtacttgatggcgctccaggagcttaat
cgatgtccatttagagtagttgatgaaatcaatcagggaatggacccgatcaatgaacgg
agagtgtttgaaatggttgtaaatactgcttgtaaagaaaatacatctcagtacttcttt
attacaccaaagctcctgcagaatcttccttattctgagaagatgaccgtattgtttgtc
tacaatggtcctcatatgttggaacctaacagatggaatttaaaggctttccaaaggcgg
cggcgccgtatcacattcactcaaccttctcaataa
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