Canis lupus familiaris (dog): 476336
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Entry
476336 CDS
T01007
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor precursor
KO
K20053
very low-density lipoprotein receptor
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa05017
Spinocerebellar ataxia
cfa05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
476336 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
476336 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
476336 (VLDLR)
Membrane trafficking [BR:
cfa04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
476336 (VLDLR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
476336
NCBI-ProteinID:
NP_001273907
Ensembl:
ENSCAFG00000002028
VGNC:
48269
UniProt:
A0A8C0N5Z3
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Position
1:91709985..91740404
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AA seq
873 aa
AA seq
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MGTSARWALWLLLALCWAPRESRATGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCNNGQCVPNRWQCDGDPDCEDGSDENPEQCHMRTCRINEISC
GARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCS
DGSDELDCAPPTCGEHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVMHTKCP
ASETQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDIGKVCNQEQDCRDWSDEPLKECHVNEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDKKICGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDVASKTISVA
TLDGTRRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQ
WPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMQNGGCEYLCL
PAPQINDHSPKYTCSCPNGYTLEANGRECHSTATTLTYSETKDIHTTEIPPTSGLVPRGI
NVTTAVSEATVPPKGTSAAWAILPLLLLAMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKT
TEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gagagccgcgccaccggagcgggaagaaaagccaaatgtgaaccctcccaattccagtgc
acaaatggccgctgtattacattgctgtggaaatgcgacggggatgaagactgcgctgat
ggcagtgacgaaaagaactgtgtaaagaagacgtgtgcagagtctgactttgtgtgcaac
aatggccagtgcgtccccaaccggtggcagtgtgacggggatcctgactgtgaagatggt
tctgatgaaaacccagaacagtgccatatgagaacatgccgcataaatgaaatcagctgt
ggcgcccgttctactcagtgtatcccagtgtcctggaggtgtgatggtgaaaatgattgt
gacagtggagaagatgaagaaaactgtggcaacatcacatgcagcccggacgagttcacc
tgctccagcggccgttgcatctccaggaacttcgtctgcaatggccaggacgactgcagt
gacggcagcgacgagctggactgcgcgccccccacgtgcggcgagcatgagttccagtgc
agcacctcttcctgcatccccctgagctgggtatgcgacgatgacgccgactgctccgac
cagtcagatgagtccctggagcagtgtggccgccagcccgtgatgcacaccaagtgccca
gccagcgagacccagtgcggctcaggcgagtgcatccacaagaagtggcgctgcgatggg
gaccccgactgcaaagacggcagcgacgaggtcaactgtccttcgagaacctgccggcct
gaccagtttgagtgtgaggacgggagctgcatccatggcagcaggcagtgcaacggtatc
agggactgtgtggacggctcggatgaagtcaactgcaagaacgtcaatcagtgcttgggc
cctggaaagttcaagtgcagaagtggggagtgcatagatatcggtaaagtatgtaaccag
gagcaggactgcagggactggagtgacgaacccctgaaagaatgtcacgtaaatgaatgc
ttggttaataatggtggctgttcgcacatctgcaaagacctagttataggctatgaatgt
gactgcgcagctgggtttgaactgatagataagaaaatttgtggagatattgacgaatgc
caaaatccaggaatctgcagccaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcggggctatcagatggatcttgccaccggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatcttcacaaatcgaagagacatccggaagattggcttggagaggaaagaa
tatattcaactagttgaacagctaagaaacactgtagctcttgatgcagacattgcagct
cagaaactgttctgggctgatctgagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgtggcttctaagactatttcagtagct
accctagatgggaccagaaggaagttcctgtttaactctgacttgcgggagcctgcctcc
atagctgtggatccactctctgggtttgtgtactggtcagactggggagaaccagctaaa
atagaaaaagcaggaatgaatggatttgataggcggccacttgtgacagtggacatccaa
tggcctaatggaattacacttgaccttataaagagtcgcctctactggcttgactccaag
ttgcacatgttgtccagcgtggacttaaatggccaagaccgtaggattgtccttaaatct
ctggagttcctagctcatcctctggcgctaaccatatttgaggatcgtgtctactggata
gatggggaaaatgaagcagtctacggtgccaataaattcactggatcagagctggccacg
ctagtaaacaaccttaatgatgcccaagacatcattgtctatcacgaactcgtccagccg
tcaggtaaaaactggtgtgaagaggacatgcagaatggaggctgtgaatatctgtgcctg
ccagcaccacaaatcaacgatcactctccaaaatacacgtgttcctgtcccaatgggtac
actctagaggcaaacggccgggagtgccacagtactgcaactactctgacttacagtgag
acaaaagatatccacacaacagaaattcctccaactagtggactagttcccagagggatc
aatgtgaccacagcagtatcggaggccactgttcccccaaaaggcacttctgctgcctgg
gccatccttcctctcttgctcttagcaatggcagcggtaggtggctacttgatgtggcgg
aattggcagcacaagaacatgaaaagcatgaactttgacaatcctgtgtacttgaagact
actgaagaggacctgtccatagacattggtagacacagtgcttctgttggacacacgtac
cccgcaatatcagttgtaagcacagatgatgacctagcttga
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