Canis lupus familiaris (dog): 476431 Help Entry 476431            CDS       T01007                                  Symbol SYMPK Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism cfa  Canis lupus familiaris (dog) Pathway cfa03015   mRNA surveillance pathway cfa04530   Tight junction Brite KEGG Orthology (KO) [BR:cfa00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     476431 (SYMPK)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     476431 (SYMPK)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cfa03021]     476431 (SYMPK)    03019 Messenger RNA biogenesis [BR:cfa03019]     476431 (SYMPK) Transcription machinery [BR:cfa03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      476431 (SYMPK) Messenger RNA biogenesis [BR:cfa03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      476431 (SYMPK)     U7-dependent histone pre-mRNA processing factors      476431 (SYMPK) SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N PDS5 Cnd1 SR-25 Motif Other DBs NCBI-GeneID:  476431 NCBI-ProteinID:  XP_005616483 Ensembl:  ENSCAFG00000004376 VGNC:  47022 UniProt:  A0A8C0QDN0 LinkDB All DBs Position 1:109243265..109280560 Genome browser AA seq 1275 aa AA seqDB search MAGSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK VVKPESVLIKRRLSAQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQK DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR SFTPHQQAHIPNSIMTILEASGKQEPEAKEVPAGPLEEDDLEPLALAPAPAPRPAQDLIG MRLAQEKALKRQLEEEQKLKPGVGAPSSSSSSSSSSSSSTRPGPPQPEEAIDFREEGPEC ETPAIFISMDDDSGLTEAALLDSSLEGPLPKEAAGGLTSKEERSPQTLAPAGEDTMKTPS PAAEESGEPETKGNS NT seq 3828 nt NT seq  +upstreamnt  +downstreamnt atggcaggcagcagtggagatagtgtcactcggcggagcgtggcatcacagttcttcaca caggaggaggggccgggcatcgatggcatgaccacctcagaaagagtggtggatctcctg aaccaggcagcactgattaccaatgattcaaagatcacagtactcaaacaggtccaggaa ctgatcatcaacaaagatcctacactgctggacaactttctggacgagatcatcgctttc caagcggacaagtcgatcgaagtgcgcaaatttgtcatcggcttcatcgaggaggcatgc aaacgagacattgagttactgctgaaactgattgcaaacctcaacatgctcttgagggat gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc ctacagtggatggtaaagtcacgagtcatcagtgagctccaagaggcctgctgggacatg gtgtctgccatggctggggacatcattctgctgctggattctgacaatgacggcatccgc acccacgccatcaagtttgtggaaggcctcattgtcaccttgtcaccccgcatggctgac tcagaagtgccccgacgccaggagcatgacatcagcctagaccgcatccctcgtgaccac ccctatatccagtacaatgtgctgtgggaggaaggcaaggcggccttggagcagctgctc aagttcatggtccaccccgccatctcctccatcaacctgaccacagctctgggctcactc gccaatatcgcccgccagaggcccatgttcatgtcagaggtgatccaggcctatgaaacc ctgcatgccaacctgcccccgacgctggccaaatctcaggtgagcagtgtgcgcaagaac ctgaagctgcacctgctgagcgttctgaagcacccagcctccttggagtttcaggcccag atcaccaccctgctggtggacctgggcacacctcaggcagagatcgcccgcaacatgccc agtggcaaggatgcccgcaagcggccccgagacgactcggattccacactcaagaagatg aaactagagcccaacctgggggaagatgatgaggacaaggacttggagccaggcccgtca ggaacctcaaaggcctcagcccagatctcaggccagtcagacacagacatcacagccgag ttcctgcagcccttgctgacgcctgacaatgtggccaatctggtactcatcagcatggtg tacctgcccgaagccatgcccgcctccttccaagccatctatacaccagtggagtccgca ggcactgaagcccagatcaagcacctggctcggctcatggccacacagatgacagctgca ggactagggccaggtgtggaacagaccaaacagtgcaaagaggaacccaaagaggagaag gtggtgaagccagagagcgtcctgatcaagcggcgcctgtcagcccaaggccaggccatc tccgtggtgggctccctgagttccatgtctactctggaggaggaggcgccccaggccaag aggaggccagagcctatcatacctgtcacgcagccccggctggcgggcgctggtgggcgc aagaaaatattccgtctgagcgatgtgctgaagcccctcacagacgcccaagtggaggct atgaagctaggcgctgtgaagcggatcctacgcgcggagaaggccgtggcctgcagcggg gcggcccaggtgcgcataaagatcctggccagtctggtcacacagtttgactcgggcttg aaggccgaagtcctgtccttcatcctggaggatgtgcgggcccgcctggacttggccttc gcctggctctaccaggagtacaacgcctacctagcagccggtgcctcaggcaccctggac aagtacgaagactgccttatccgcctgctctccggcctgcaggagaagccagaccagaag gatgggatcttcactaaagttgtgctggaggcaccactgatcaccgagagtgccctagag gtgattcgcaagtactgtgaggatgagagtcgcacttacctgggcatgtccaccctccga gacctgatcttcaagcgcccatcccgccagttccagtacctacatgttctgctagacctc agctcccacgagaaggacaaggtgcgttcccaggccctactattcatcaagcgcatgtat gagaaggaacagctgcgagagtatgtggagaaatttgccctcaattacctgcaactcctg gtccatcccaacccaccatccgtgctgtttggagctgacaaggatacagaggtggcggcg ccctggaccgaggagaccgtaaagcagtgtctgtacctctacctggctctcctgcctcag aaccacaagttgatccacgaattggcagccgtgtacactgaggccattgctgacatcaag cggacggtgctgagggtcattgaacagccgatccgaggaatgggcatgaactcaccagag ctgctgctgctggtagaaaactgtcccaagggggcagagacactggtcacacgatgtcta cacagcctcacggacaaagtcccaccctccccagagctggtgaagcgggtccgggatctc taccacaagcgattgccagatgtccgcttccttatccctgtgctcaatggactggagaag aaagaagtgatccaggctctgccaaagctcatcaaactcaaccccattgtggtgaaagag gtcttcaatcgcctgctgggcacccagcatggcgaagggaactcggccttgtcccccttg aaccctggagagctgctgatcgcattgcacaacatcgactcggtgaagtgtgacatgaag tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacatcggaggtg ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg accgtcatccagtctctgaccatgtacccccgcctggggggcttcgtcatgaacatcctg tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag tgctgtcaacgcaccaagccccagagcttccaggtcatcctgcagctgccaccccagcag ctgggtgccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtccga tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc agtggcaagcaggagccagaggccaaggaagtgcctgcggggcccctggaagaggacgac ctggagcctttggcccttgcaccagccccagccccgcgccccgctcaggacctcatcggc atgcggctggcccaggagaaagccttaaagcgtcagttggaggaggaacagaagctgaag ccaggagtgggagccccctcgtcgtcgtcgtcatcgtcgtcgtcgtcctcttcctccacc cggccaggccctccccagcccgaggaagccatagatttccgggaggaggggcccgagtgt gagacccccgccatcttcatcagcatggatgacgactcggggctgaccgaggccgcactc ctggactctagtcttgaggggcccctacctaaggaggcagcgggcgggttgacctcaaag gaggagcgcagtccccagaccctcgcccctgccggagaagacaccatgaagacccccagc cccgccgccgaggaatccggggaacccgagaccaaggggaacagttga

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