Canis lupus familiaris (dog): 476640 Help Entry 476640            CDS       T01007                                  Symbol SMARCC1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism cfa  Canis lupus familiaris (dog) Pathway cfa03082   ATP-dependent chromatin remodeling cfa04714   Thermogenesis cfa05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:cfa00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     476640 (SMARCC1)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     476640 (SMARCC1)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     476640 (SMARCC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cfa03021]     476640 (SMARCC1)    03036 Chromosome and associated proteins [BR:cfa03036]     476640 (SMARCC1) Transcription machinery [BR:cfa03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      476640 (SMARCC1) Chromosome and associated proteins [BR:cfa03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     476640 (SMARCC1)    PBAF complex     476640 (SMARCC1)    GBAF(ncBAF) complex     476640 (SMARCC1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 Chromo BRCT_2 DUF919 SpeFL Motif Other DBs NCBI-GeneID:  476640 NCBI-ProteinID:  XP_533845 Ensembl:  ENSCAFG00000013136 VGNC:  46535 UniProt:  A0A8C0P6B2 A0A8I3RW34 LinkDB All DBs Position 20:41082515..41253825 Genome browser AA seq 1107 aa AA seqDB search MAAAAGGGGLGAAAGAAGAGGAAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLIPDIDLKL ANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG KEDDDPSKGDQSRSLDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK MEADTDGQHPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKE LTDTCKERESDLGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ QQHGQNPQQAHQHSGGPSLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQMPGP GSMIPGQPIPGRMIPTVAANIHPPGSGPAAPGMPPMPGNILGPRVPLTAPNGMYAPPPQQ QQPPPPPPPADGVPPPPAPGPPASAAP NT seq 3324 nt NT seq  +upstreamnt  +downstreamnt atggccgcggcggcgggcggcggcgggctgggggcggcggcgggcgccgcgggcgcagga ggcgcggcggcggccgcgggcctggcggtttatcggcggaaggacggtggcccggccagc aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc aagcactacaagaagtatgttcatgcggatgctcctaccaataaaacactggctgggcta gtggtacagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaatccggcc ttcaccaaactcccggcaaaatgtttcatggatttcaaagctggaggaaccttgtgtcac attcttggggctgcttacaagtataaaaatgaacaaggatggcggaggtttgatctacag aatccatctcgaatggatcggaatgttgaaatgtttatgaacattgaaaaaactttggtg cagagcaattgtctgaccagacccaacatctacctcattccagacattgatctgaagttg gctaacaaattgaaagatattatcaaacgacatcaggggacttttactgatgagaagtca aaagcttcccaccacatttatccatatccttcctcacaagaggatgaagaatggttgaga cccgtgatgagaaaagataagcaggtgttagtgcattgggggttttacccagacagctat gatacttgggtccatagtaatgatgttgatgcagaaattgaagatccaccaattccagaa aagccatggaaggttcatgcgaagtggattttggacactgatgttttcaatgaatggatg aatgaggaggattatgaggtagacgagaacaggaagcctgtgagctttcgtcagcgaatt tcaacaaagaatgaagagccagtcagaagtccagagagaagagataggaaagcatcagct aatgctcgaaagaggaaacattcaccttcccctccacctcctacacccacagaatcccgg aagaagagtggaaagaaaggtcaagctagtctctatgggaagcgcagaagtcaaaaagag gaagatgagcaagaagatcttaccaaggacatggaagacccaacaccggtacccaacata gaggaagtggtgcttccaaaaaatgtgaacccaaagaaggacagtgaaaatacacctgtt aaaggaggaactgtagcagatctagatgagcaggatgaagaaacagtcacaacaggagga aaggaagatgacgatcctagcaaaggtgatcagagtcgctcacttgaccctggagaagat aatgtgacagagcagaccaatcacattattattcctagctatgcatcttggtttgattac aactgtattcacgtgattgaacggcgtgctcttcctgagtttttcaatggaaaaaacaaa tccaagactccagaaatatacttggcatatcgaaattttatgattgacacatatcgccta aacccacaagagtatttaaccagcactgcttgtcggaggaacttgactggagacgtgtgt gctgtgatgagggttcatgcctttttagagcagtgggggcttgttaattaccaagtggat ccagaaagtcgacccatggcaatgggacctcctcctactcctcattttaatgtgttagct gataccccctctgggcttgtgcctctacatcttcgatcacctcaggtccctgctgctcag cagatgttaaattttcctgagaagaacaaggagaaaccaattgatttgcagaactttggt cttcgcactgacatttactccaagaaaaccttagcaaagagtaaaggtgctagtgccgga agagaatggactgaacaggagaccctcctgctcctggaggccctggagatgtacaaggat gattggaacaaagtgtcagagcacgtcggaagtcgtactcaggatgaatgcatcctccac tttctgaggcttcctattgaggacccataccttgagaattcggatgcttccctggggccc ctggcctaccagcctgtccctttcagtcagtctggaaacccagtcatgagcactgttgct tttttggcatctgtggtggaccctcgtgtggcatctgctgcagcaaaagcagctttggag gagttttctcgggtccgagaggaggtcccattggaattggttgaagctcatgtcaagaaa gtacaagaagcagcacgagcctctgggaaagtggatcccacctacggcctggaaagcagc tgtattgcaggcacaggacccgatgagccagagaaacttgaaggagctgaagaggaaaaa atggaagcagatactgatggtcagcatcctgaaaaggcagaaaacaaaggggaaaatgaa acagatgaaggtgataaagcacaagatggagaaaatgaaaaaaatagtgagaaggagcag gacagtgaagttagtgaggatactaaatcagaagaaaaggaaactgaggagaacaaggaa ctcactgatacttgtaaagaaagagaaagcgatctcgggaagaagaaagtagagcacgaa atttccgaaggaaatgtagccacggccgcagcagctgctcttgcctccgctgcaaccaaa gccaagcacctggctgctgtggaagagagaaagatcaaatctctagtggccctcctggtt gagacacagatgaagaaactggagatcaaacttcgacattttgaggagctggaaactatc atggacagagaaaaggaggctttagaacaacagaggcagcagctgctcactgaacgccag aacttccacatggaacagctgaaatacgccgaattgcgagcccgacagcaaatggaacag cagcagcatgggcagaaccctcagcaggcacaccagcactcaggaggacctagcctggca ccactcggagcagcagggcaccctggcatgatgcctcatcagcagccccctccctaccct ctgatgcaccaccagatgccaccacctcatccaccgcagccaggtcagatgccaggtcca ggttccatgatccctgggcaacccattccaggccgcatgattcccactgttgcagccaac atccacccccctgggagtggcccagccgctcctggtatgcctccaatgccaggaaacatc ttaggaccccgggtaccactcacggcacctaatggcatgtatgcccctccgccgcagcag cagcagccgccgccaccaccaccgcctgcagatggagtccctccgcctcctgctccaggc cctccagcgtcggcggccccctag

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