KEGG   Canis lupus familiaris (dog): 476654
Entry
476654            CDS       T01007                                 
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    476654 (EXOSC7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfa03019]
    476654 (EXOSC7)
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     476654 (EXOSC7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     476654 (EXOSC7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 476654
NCBI-ProteinID: XP_533858
Ensembl: ENSCAFG00000014055
VGNC: 40527
UniProt: A0A8C0T445 A0A8I3NDF2
LinkDB
Position
20:complement(43259496..43295233)
AA seq 291 aa
MASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSID
LKSLCISPREHCWILYVDVLLLECGGNLFDTICIAVKAALFNTRIPRVRVLEDEEGSKDI
ELSDDPYDCFRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSKGVVTCMR
KVGKGSLDPESIFEMMETGKRVGKVLHASLQSVLHKEESLGPKRQKVGFLG
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcgtccgtagcgctgagcgaggcggagaaggtgtacatcgtgcacggcgtccaggaa
gacctccgtgtggatggccgtggctgtgaggactaccgatgtgttgaagtagaaactgac
gtggtgtctaacaccagtgggtcggccagagtcaaactaggtcacacagacatcttggtg
ggagtgaaagcagaaatggggacgccaaagctggagaaaccaaatgaaggctacttggag
ttctttgttgactgttcagccaatgctacccctgagtttgaaggccgaggaggtgatgac
cttggcacagagattgctaacaccctctaccggatatttaacaacaagagcagcattgac
ctgaagtccctctgcattagtccccgggagcattgctggattctctatgtggatgtgctg
ctgctggaatgtggtgggaatttgttcgacaccatctgcattgccgtgaaggctgctctc
ttcaacacaaggataccaagagttcgtgttttagaggatgaagaggggtccaaggacatt
gaactctcagatgacccttatgactgcttccggctaagtgtggagaatgtcccttgcatt
gtcaccctgtgcaagattggctatcggcatgtagtggatgctactcttcaggaggaggcc
tgctccttggccagcttgttggtgtctgtgaccagcaagggagtcgtgacatgcatgagg
aaagtggggaagggcagcctggacccagagagcatcttcgagatgatggagactggcaag
cgagtgggcaaggtgctgcacgcctccctgcagagcgtcctacacaaggaggaaagcctg
gggcccaagagacagaaagttggattcctggggtga

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