Canis lupus familiaris (dog): 476654
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Entry
476654 CDS
T01007
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
476654 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
476654 (EXOSC7)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
476654 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
476654 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
476654
NCBI-ProteinID:
XP_533858
Ensembl:
ENSCAFG00000014055
VGNC:
40527
UniProt:
A0A8C0T445
A0A8I3NDF2
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All DBs
Position
20:complement(43259496..43295233)
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AA seq
291 aa
AA seq
DB search
MASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSID
LKSLCISPREHCWILYVDVLLLECGGNLFDTICIAVKAALFNTRIPRVRVLEDEEGSKDI
ELSDDPYDCFRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSKGVVTCMR
KVGKGSLDPESIFEMMETGKRVGKVLHASLQSVLHKEESLGPKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtagcgctgagcgaggcggagaaggtgtacatcgtgcacggcgtccaggaa
gacctccgtgtggatggccgtggctgtgaggactaccgatgtgttgaagtagaaactgac
gtggtgtctaacaccagtgggtcggccagagtcaaactaggtcacacagacatcttggtg
ggagtgaaagcagaaatggggacgccaaagctggagaaaccaaatgaaggctacttggag
ttctttgttgactgttcagccaatgctacccctgagtttgaaggccgaggaggtgatgac
cttggcacagagattgctaacaccctctaccggatatttaacaacaagagcagcattgac
ctgaagtccctctgcattagtccccgggagcattgctggattctctatgtggatgtgctg
ctgctggaatgtggtgggaatttgttcgacaccatctgcattgccgtgaaggctgctctc
ttcaacacaaggataccaagagttcgtgttttagaggatgaagaggggtccaaggacatt
gaactctcagatgacccttatgactgcttccggctaagtgtggagaatgtcccttgcatt
gtcaccctgtgcaagattggctatcggcatgtagtggatgctactcttcaggaggaggcc
tgctccttggccagcttgttggtgtctgtgaccagcaagggagtcgtgacatgcatgagg
aaagtggggaagggcagcctggacccagagagcatcttcgagatgatggagactggcaag
cgagtgggcaaggtgctgcacgcctccctgcagagcgtcctacacaaggaggaaagcctg
gggcccaagagacagaaagttggattcctggggtga
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integrated database retrieval system