Canis lupus familiaris (dog): 476678
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Entry
476678 CDS
T01007
Symbol
NWD1
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT domain- and WD repeat-containing protein 1 isoform X7
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cfa04990
]
476678 (NWD1)
Domain-containing proteins not elsewhere classified [BR:
cfa04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
476678 (NWD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
NACHT
AAA_16
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Nucleoporin_N
Beta-prop_LRRK2
Beta-prop_TEP1_C
Beta-prop_Nup120_160
NPHP3_N
CNH
Beta-prop_SCAP
AAA
AAA_22
Beta-prop_Vps41
Beta-prop_WDR75_2nd
ATPase_2
Beta-prop_IFT122_1st
Beta-prop_EIPR1
DUF4062
AAA_5
RuvB_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
476678
NCBI-ProteinID:
XP_038310858
Ensembl:
ENSCAFG00000015626
VGNC:
44069
LinkDB
All DBs
Position
20:complement(45706235..45772311)
Genome browser
AA seq
1570 aa
AA seq
DB search
MDTQIWMQREKLCRALPSPKCXTFCQKNGLMFEVVDLRWGIRNTEATDHMTTELCLEELD
RCRKTSIGPAFVALLGDQYGPCPVPTLIEEKEWEALRSQLASKPRDLELVARRFRRDENA
VPPTYLLQALGTAETQGPEEATLTSVLRSGAQEARRLGLITQEQWHRYHWSVIEWEIDRG
LLSLTDGDQGATVFLREIQDLNKHILEDCALKMVDRLADGCLDTDAQNLLSGLKGRIADT
QPGVLKAHHLPWSRDLVNPKNKAHARYLKELGEQFVARANHQVLEHLREQEAGRQELAWL
YQEIRHHLGLSTEATWTFCGRQELLAQLGQRLRQSDGHPHSPLVLFGPPGIGKTALMCKL
AEQMPGLLGRKTVTVLRLLGMSQMSSDARGLLQSICFQVCLAYGLPLPPAQVLEAHARVV
QFFHTLLHTVSCRNFESLVILLDSMDDVDSICRARRVPWLPPRCPPRIHLILSACSGKPG
ILDIMRQTLTDPEAYWEVKPLSGNQGQEMIQLLLAASRRTLSPGQRELLWASLPECGHPG
RLRLAFEEARKWASFTIPAPLASTAKEAIHQLCARLEQTHGQLLVAHVLSYIVSSRHGLS
EAELKDVLSLDDEVLEAVYQDWTPPSKELLRFPPLLWVRLRRDLGHCLARRPVDGFTLLA
IAHRQLTEVIQERYLSGPERAKRHGVLADFFSGAWSQGTKKLITLPLVGKPLNLDRKVAP
QPLWFSDTVANLRKLKELPHHLVHSGRFEELKQEVLGSMNWISCRGVSGGIEGLLEDFDL
YGPHLDCPEVGLVRDALQLCRPALELRGMERSILYTELLARLHFFATSHPALVGQLCQQA
QSWFRLCPHPVLVPLGGFLQPPGGPLRATFTGCHKGITAMGWSLEEKLLVVGTQDGLMAV
WDMEEQQVIHILTGHTGEVRSVKVFGKGTLVLSASKDHTLRLWNLLSGQQKFTIWDGGSK
DPTDPEIWSLHVDEAKKVVYLASGSKISAWNLETAELVFHILGDASDCWMCTAVLASRAT
LLTVSEGGVVSLWSSGTGKLQGRHHLSSIKEETPTCGVSVQKQGKMVTGFSKGSISLVSP
GGDSLLEKLPEAVRFLVVSEDESLLAAGFGRSVRIFLADSQGFHRFMATDLEHEDTVEIA
GFGPENNLIVTASRDALIQVWSLSEQGTLLDILEGVGAPVSLLAWAGALVASASQQSSSL
KVWDLTYIQKPRACTPFLDRTGLTAVSHNGSYVYFPKIGDKNKVTIWDSAEGEEQDALDT
SNEVRCLEVAQQANLLFTGLVSGVVLVFPLNSRQDVMCIPPPEARKAINCMALSKGEERL
AIAYDSIVLVLDISPGDPCPVIDGPTYTFYTQLPEAISSVAVLADYRVIYGMTNGDLFLY
ECANSKVFPLEAHGSQVTCMQVSHKEQLAVSGSEEALLCLWDLQACKWRFQMSYTNSYCR
GVQCVCFSKDDKYVYAGLKDRSIIVWSVLDGTLLAVQFVHAVVNRIIPTSNGFIAPTRHG
YLIRERFQCPSSRVSQQDPLKNFKKAVWKVKSRQREELAAAAGALQDSRSASAQGNERKS
NKRSQVCLLV
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggacacccagatatggatgcagagagagaagctctgcagagcactgccttccccgaag
tgcnagaccttctgccaaaagaatggcctgatgttcgaggttgttgacctgaggtggggt
attcggaacactgaggccactgaccacatgaccacagaactctgcttggaggagctcgac
cggtgtcggaaaacatccatagggccggcttttgttgccctcttaggtgaccagtacggc
ccctgtccagtccctacactgatcgaggagaaggagtgggaggccctgagatcccagctg
gcctccaagccacgtgacctggagctggtggctcgacgcttccggagggatgagaacgcc
gtgccccccacctacctgcttcaggccctaggcactgcggagacccaggggcccgaagag
gccaccctgacctctgtgctgcgctccggagcccaggaggcccggaggctgggcctcatc
acccaggagcagtggcaccgctaccactggtcagtcattgagtgggagatagaccggggc
ctgctgagcttgacagacggagaccagggggcgactgtcttcttgagagagatccaagac
ctcaacaaacacatcctggaagactgcgccctcaagatggtggaccggctcgcagatggc
tgcctggacacagatgcccagaaccttctcagtggcctcaagggacgcattgccgacaca
caacctggagtcctcaaggcccaccacctgccatggagccgagacctggtgaaccccaaa
aacaaggctcatgctcggtacctgaaagagctgggggagcagtttgtggccagggctaac
caccaggtccttgagcacctccgggagcaggaggcaggcaggcaggagttggcgtggctc
taccaggagatccgccaccacctggggctgagcaccgaggccacctggaccttttgtggc
cgccaggagctcctggcccagctggggcagcggctccggcagagcgatggccatccgcac
tcacccctggtgctttttggacctccaggcatcggaaagacagcgctgatgtgcaagttg
gcagaacaaatgccgggactgcttggccgcaagacagtgaccgtcctgcggcttctgggg
atgtcacagatgagctccgacgcccgaggcctgctccagagcatctgcttccaggtgtgc
ctggcctacgggctgcccctgccccctgcccaggtcctggaggcccatgccagggtggtc
cagtttttccacaccctcctccacactgtctcctgccgaaacttcgagtcacttgtgatc
ctgttggactccatggatgatgtggattccatctgccgcgcccggagggtcccctggctg
cctccccggtgccccccgaggatccaccttatcctctcagcctgctcggggaagccgggg
attctagacatcatgagacagacgctgacggacccagaggcctactgggaggtgaaaccc
ctctccggaaaccaagggcaggagatgatccagctcctgctggccgcctcgcggaggacg
ctgagcccagggcagagggagctgctctgggccagcctcccagagtgtgggcacccagga
cggctgaggctggcctttgaggaggcccggaagtgggcctccttcaccatacctgcccct
ctggcctccactgctaaggaagcgatccatcagctgtgtgcccgcctggagcagacacac
gggcagctcctggtggcccacgtgctgagctacatcgtgtcctcccggcatgggctctca
gaggcagagctgaaggacgtcctgtccttggacgacgaggtcctggaggcggtgtaccag
gactggaccccgcccagcaaggagctgttgcgcttccccccgttgctgtgggtgaggctc
cgtcgggatctcggccactgcttggcccggcggccggtggacggcttcacgctcctggcc
atcgcccacaggcagctgactgaggtgatccaagagcgctacctgtctgggcccgagaga
gccaagaggcacggagtcttggctgacttcttctcaggggcctggagccagggcacaaag
aaactcatcaccctgccactcgtggggaagcccctgaacctggaccgcaaggtggcgcct
cagcccctgtggttctcagacacagttgcaaatctgcggaagctgaaggagttgccccat
cacctggtccactcaggccgcttcgaagagctgaagcaggaggttctgggcagcatgaac
tggatttcctgccggggcgtctctgggggcatcgaggggctgttggaggactttgacctg
tatggccctcacctggattgtcccgaggtcggcctggtccgggacgccctccagctgtgc
cgcccggccctggagctccgaggcatggagaggagcatcctctacactgaactcctggcc
agactccatttcttcgccacctcacatccagcgctggtgggacagctgtgccaacaggcc
cagagctggttccggctgtgcccccaccctgtgctggtacctctcggggggttcctccag
ccccccgggggacccctccgggcaaccttcactggctgtcacaagggcatcactgccatg
ggctggagcctggaagagaagctgctggtagttggcacccaggatggcctcatggctgtg
tgggacatggaagagcagcaggtgatccacatcctaactggacacacaggagaggtgagg
tctgtgaaagtgtttggcaaggggacactcgtcctctctgcctcaaaggaccacacactg
cgtttgtggaacttactctctggccagcagaaattcaccatttgggatggaggctcaaaa
gatcccactgaccctgagatctggagtcttcatgtggatgaagcaaagaaggttgtgtat
ttggcatctggctcaaagatcagtgcttggaatctggaaactgcagagctggttttccat
atcctgggagatgcctccgactgctggatgtgcacagcggtgctggcttcccgggccacg
ctgctgaccgtgtctgagggcggtgtggtcagtctgtggagctcaggcacagggaaactg
caggggaggcaccatttatccagcatcaaagaagaaacacctacctgtggggtctcggtc
cagaagcaaggaaagatggtgactgggttcagcaaaggctccatctctttggtttccccc
ggaggagatagcctgctggagaagcttccagaagccgtgaggttcctggtagtctctgaa
gatgagtcccttctcgctgcagggtttggcagatccgtgcggatattcttggcagactcg
caggggtttcatcgatttatggccaccgaccttgaacatgaggacaccgtggagatagct
ggttttggtcctgagaacaatctgattgtcactgcgtcccgcgatgcactcatccaggtg
tggagcctgtcggagcaggggaccctgctggacatcctggaaggtgtcggagcccccgtg
agcctgctggcctgggctggggccctggtggcatctgcttctcagcagtcctcatctttg
aaagtctgggatctcacttacattcagaagccgagggcctgcaccccatttctggatcgt
actggcctcactgctgtgtcacacaatggaagctacgtttacttccccaaaatcggagac
aagaacaaagttaccatttgggactctgcagaaggcgaggaacaagatgccctggacacc
tccaatgaggtcaggtgtctggaggttgcccagcaggccaatctccttttcaccggcctc
gtttcaggggttgtcctggtgtttcccctgaattccagacaggatgtgatgtgcatcccc
cctcccgaggcccggaaagccatcaactgcatggccctcagtaaaggcgaggagcgcctg
gccatcgcctatgacagcattgtccttgtgctggacatcagtcccggggatccctgtccg
gttattgatgggccaacatacaccttctatacccagctgcctgaggccatctccagtgtg
gccgttctggctgactaccgcgtgatctacggcatgaccaacggtgacctctttctttac
gagtgtgcgaattccaaagtgttccctctggaggcccacgggagccaggtcacctgcatg
caggtcagccacaaggagcagctggctgtcagcgggtccgaggaagccctgctgtgtctc
tgggacctgcaggcctgcaagtggaggttccagatgagctacacgaattcttactgtaga
ggagtccagtgtgtctgcttctccaaggatgacaagtatgtgtatgcgggcttgaaggat
cgctccatcattgtctggagtgtgctggatggcaccctgctggctgtccagtttgtccat
gctgtggtgaacaggatcatcccaacttcgaatggcttcattgcccccactagacatggc
tacctgatccgcgagcgtttccagtgcccttcatcgagagtctcacagcaagatcctctc
aagaacttcaagaaggcagtgtggaaggtcaaatccaggcagagagaagagctggcagca
gctgcaggagcactccaggactcgagatcggcaagtgcccagggaaatgaacgtaaatcg
aacaaacgctcacaagtctgcctgctagtgtag
DBGET
integrated database retrieval system
