Canis lupus familiaris (dog): 476689
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Entry
476689 CDS
T01007
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
476689 (DDX39A)
Enzymes [BR:
cfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
476689 (DDX39A)
Spliceosome [BR:
cfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
476689 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
476689
NCBI-ProteinID:
XP_005632846
Ensembl:
ENSCAFG00000016355
VGNC:
39854
LinkDB
All DBs
Position
20:48072141..48080443
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AA seq
430 aa
AA seq
DB search
MSTMAEQDVENELLDYEEDEEPQAPPESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLR
AIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLV
MCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILA
LVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPV
CRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQ
RCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNI
VFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEI
DISTYIEQSR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatggcagaacaagatgtggaaaatgagcttctggattatgaggaagatgaa
gagccccaggctcctccagagagcactcctgctccccccaagaaagatgtcaagggttcc
tacgtttccatccacagctctggcttccgggactttctgctgaagccggagctcctgagg
gccatagtggactgtggctttgagcatccatctgaggtccagcacgagtgtattccccaa
gccatcctgggcatggacgtcctgtgccaggccaagtctgggatgggcaagactgcggtc
ttcgtactggccaccctgcagcagattgagccagttaatggacaggtgacagtcttggtc
atgtgccacacacgggagctagccttccagatcagcaaagagtatgaacgcttctccaag
tacatgcccagtgtcaaggtgtctgtgttctttgggggcctttctatcaagaaggatgaa
gaggtattgaagaagaactgtcctcatgtcgtggtggggacaccaggccggatcctggcg
ctagtgcggaaccggagcctgaacctgaagaacgtgaagcacttcgtgctggatgagtgt
gacaagatgctggagcagctggacatgcggcgggacgtgcaggagatcttccgcttgaca
ccccatgagaagcagtgcatgatgtttagcgccaccctgagcaaggagatcaggccggtc
tgcaggaagttcatgcaagatcccatggaggtgtttgtagacgacgagaccaagctcaca
ctgcatggactgcagcagtactacgtcaagctcaaggacagtgagaagaaccgcaagctc
ttcgacctgttggatgtgttggagtttaaccaggtggtgatctttgtgaagtccgtgcaa
cgctgcatggccctggcccagctcctcgtggagcagaacttcccggccattgccatccac
aggggcatggcccaggaggagcgtctgtcgcgctatcagcagttcaaagacttccagcgg
cggatcctggtggccaccaatctgtttggccgagggatggacattgagcgagtcaacatc
gtcttcaactatgacatgcctgaggactcggacacctacctccaccgagtggcccgtgca
ggtcgctttgggactaaaggtctggctattactttcgtgtctgacgagaatgatgcaaaa
atcctcaatgacgttcaggaccggtttgaagtgaatgtggcagaacttcctgaagaaatt
gacatctccacgtatattgagcagagccggtaa
DBGET
integrated database retrieval system
