Canis lupus familiaris (dog): 476725
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Entry
476725 CDS
T01007
Symbol
HNRNPM
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
476725 (HNRNPM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
476725 (HNRNPM)
Spliceosome [BR:
cfa03041
]
Common components
Common spliceosomal components
hnRNP proteins
476725 (HNRNPM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNP_M_NLS
RRM_MARF1
RRM_3
RRM_occluded
Collagen_mid
RBD_DEAH11
RRM_5
PhageMin_Tail
Motif
Other DBs
NCBI-GeneID:
476725
NCBI-ProteinID:
XP_005633010
Ensembl:
ENSCAFG00000018524
VGNC:
41734
LinkDB
All DBs
Position
20:52795007..52835710
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AA seq
763 aa
AA seq
DB search
MAAGVEAAAEVATTETKMEEESGAPGVPSGNGAPGPKGEGERPTQNEKRKEKNIKRGGNR
FEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFK
MEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKVMATTGGMGMGPGGPGMINIP
PSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKD
GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPERPQQLPHG
LGGIGMGLGPGGQPIDANHLNKGIGMGNIGPAGMGMEGIGFGINKMGGMEGPFGGGMENM
GRFGSGMNMGRINEMERGMGGGFERDFARNKMGMSRSFGEPLGRGMEILSNALKRGEIIA
KQGGGGGGGSVPGIERMGPGIDRIGGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV
ERMGSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT
IERMGSGVERMGPAIERMGLSMERMVPAGMGAGLERMGPVMDRMATGLERMGANNLERMG
LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGGGGASFDRAIEMER
GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME
NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggggtcgaagcggcggccgaggtggcgacgacggagaccaaaatggaggag
gagagcggcgcgcccggcgtgccaagcggcaacggggctccgggcccgaagggtgaagga
gagcgacctactcagaatgagaagaggaaggagaaaaacataaaaagaggaggcaatcgc
tttgagccatatgccaatccaactaaaagatacagagccttcattacaaacatacctttt
gatgtgaaatggcagtcacttaaagacctggttaaagaaaaagttggtgaggtaacatac
gtggagctcttaatggacgctgaaggaaagtcaaggggatgtgccgttgttgaattcaag
atggaagaaagcatgaaaaaagctgccgaagttctaaacaagcatagtctgagtggaaga
ccactgaaagtcaaagaagatcctgatggtgaacatgccaggagagcaatgcaaaaggtg
atggctacgaccggtgggatgggtatgggaccaggtggcccaggaatgattaatatccca
cccagtatcctaaataatcctaacatcccaaatgagattatccatgcattacaggctgga
agacttggaagcacggtatttgtagcaaatctggattataaagttggctggaagaagctg
aaggaagtttttagtatggctggtgtggtggtccgagcagacattcttgaggataaagat
ggaaaaagtcgtggaataggcactgttacttttgaacagtccattgaagctgtgcaagcc
atatctatgtttaatggtcaactgctatttgatagaccaatgcacgtgaaaatggatgaa
agggccttaccaaaaggagattttttccctcctgagcgtccacagcaacttccccatgga
cttggtggtattggcatggggttaggcccaggaggacagcctattgatgccaatcacctg
aataaaggcattggcatgggaaacataggacccgcaggaatgggaatggaaggcatagga
tttggaataaataaaatgggaggcatggagggaccttttggtggcggtatggaaaacatg
ggtcgatttggatctgggatgaacatgggcagaataaatgagatggagcgtggcatgggt
ggaggatttgagagagactttgccagaaacaagatgggaatgtctcgaagctttggcgag
ccccttggcagaggaatggaaatcctaagtaatgcactgaagagaggagagatcattgca
aagcagggaggaggtggaggtggaggcagtgtccctgggatcgagaggatgggccctggc
attgaccgcattgggggtgccggcatggagcgcatgggcgcaggcctgggccatggcatg
gatcgtgtgggctccgagattgagcgcatgggcctggtcatggaccgcatgggctcagtt
gagcgcatgggctctggcatcgagcgcatgggcccactgggcctcgaccacatggcctcc
agcatcgagcgcatgggccagaccatggagcgcatcggctctggcgtggagcgcatgggt
gccggcatgggctttggccttgagcgcatggccgcgcccatcgaccgcgtgggccagacc
attgagcgcatgggctctggtgtagagcgtatgggccctgccatcgagcgcatgggcctg
agcatggagcgcatggtgcccgcaggcatgggggctggcctggagcgcatgggccctgtg
atggatcgcatggccaccggcctggagcgcatgggcgccaacaacctggagcgaatgggc
ctggagcgaatgggcgccaacagtctcgagcgcatgggcctggagcgcatgggcgccaac
agcctggagcgcatgggtcctgccatgggtccagccctaggtgctggcattgagcgtatg
ggcctggccatgggtggcggtggcggtgccagctttgaccgcgccatcgagatggagcgt
ggcaactttggaggaagcttcgcaggttcctttggcggagctggaggccatgctcctggg
gtggccaggaaggcctgccagatatttgtgagaaatctcccatttgattttacatggaag
atgctaaaagacaaattcaacgaatgtggccacgtgctgtatgccgacatcaagatggag
aacgggaagtccaaggggtgcggtgtggttaagtttgagtcgccagaggtggctgagaga
gcctgccggatgatgaatgggatgaagctgagtggccgagagattgatgttcgaatcgat
agaaatgcttaa
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integrated database retrieval system
