Canis lupus familiaris (dog): 476822
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Entry
476822 CDS
T01007
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03013
Nucleocytoplasmic transport
cfa05014
Amyotrophic lateral sclerosis
cfa05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
476822 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
476822 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
476822 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
476822 (NUP98)
03036 Chromosome and associated proteins [BR:
cfa03036
]
476822 (NUP98)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
476822 (NUP98)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
476822 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ANAPC3
Motif
Other DBs
NCBI-GeneID:
476822
NCBI-ProteinID:
XP_038312457
Ensembl:
ENSCAFG00000005871
VGNC:
44063
UniProt:
A0A8C0THN7
A0A8I3NDG5
LinkDB
All DBs
Position
21:complement(26000857..26119031)
Genome browser
AA seq
1817 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTAGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFAQAITTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGSSIF
GSKPGPGTLGTGLGAGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFG
APQAPVALTDPNASAAQQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNRDSEDLASPSDYPENGERFSFLSKPVEDNHQQDGDDDSLVSRFYT
NPIAKPIPQTPESAGNKHNSSSSVDDTIVALNMRAALRNGLEGSSEETSFHEESLQDDRE
EIENNTYHMHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTS
TKKLKTAPLPPAGQATPFQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLD
SMLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDMVLDQRFSHLPSKA
DTSQEICSPRLPISASHSSKSRSLVGGLLQSKFTSGSFLSPSASVQECRTPRAASLMNIP
STSPWSVPPPLTSVFTVPSPAPEIQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDMALFMG
RSFRVGWGPNWTLANSGEQLSGSHELENHQIADSMEYGFLPNPVAVKSLTESPFKVHLEK
LSLRQKKPDEDIQLYQIPLELKLKHSTVHVDELCPLIVPNPGVAVIHDYANWVKKASGDF
LEAQIVKHWSLTWTLCEALWGHLKEPDSQLDEPSEYIQILERRRTFSRWLSHTAAPLIEE
EVSLTRKDKPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQLVGSQSIRELLTMQLV
DWQQLQANCFIQDERLRIFALLAGKPVWQLTEHRQINVCSFLDWKRALAVHLWYLLPPTA
SISRALSMYEEAFQSSSEADRYACSPLPSYLEGSGYVIEEEQNSQRPLQDVCFHLLKLYS
DRHYDLNQLLEPRSVTADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQTSYAGQLESEG
LWEWAVFVLLHIDNSSMREKAVRELLTRHCQLVETPESWAKETFLTQKLCVPAEWINEAK
AVRAHMESDKHLEALYLFKAGHWNRCHKFIIKHLASDAIINENYDYLKGFLEDLAPPERS
SLIQDWETSGLVYLDYIRIIEMLHQIQQVDCSVYELEQLHAKVISLCNRIQQMQCYNAKD
LLAQSDMAKRAANLLRVVWSLQRAPDTTSDSTPDPQRVPLGLLAPHIGQLPMPEDYALEE
LRGLTQSYLRELTVGSQ
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaacaccctttgggggtggcactggtggctttggcacaact
tcaacatttggacagaacactgggtttggcactactagtggaggggcatttggaacatct
gcatttggttctagcaacaatactggaggcctctttggaaattcacagaccaaaccagga
ggattatttggtactaattcatttagtcagccagctacttccacaagcactggctttggg
tttggcacatcaacaggaacatcaaatagcttgtttggaactgcaagtacagggaccagt
ctcttctcatcccaaaacaatgcctttgcacaaaataaaccaactggctttggaaatttt
ggaacaagtactagcagtgggggactttttggtactacaaatacaacctccaatcctttt
ggtagcacatctggttctctctttgggccaagtagttttacagctgctcctactggaacc
actattaagttcaatcctccaactggtacagatactatggttaaagctggagttagcacg
aacatcagtaccaagcatcagtgtattactgctatgaaagaatatgaaagcaagtcacta
gaggaacttcgtttagaggattatcaggcaaaccggaaaggcccgcagaaccaagtggga
gcaggtaccacagctggcttgtttgggtcttctccagccacctccagtgcaacaggactc
ttcagctcctctaccactaattcaggctttgcatatggtcagaacaaaacagcctttgga
actagtaccactggatttggaacaaatccaggtggtctctttggccaacagaatcagcag
actaccagcctcttcagcaaaccgtttgcccaggccataaccacccagaacactggcttt
tcctttggtaataccagcacactaggacagccaagcaccaacaccatgggtttatttggg
gtaacccaagcttcacaacctggaggtctttttgggacagctacaaataccagcactggg
acagcatttggaacaggaacaggtctctttgggcagcccaacactggatttggtgctgtt
ggttcgaccctgtttggcaataacaagcttactacatttggaaccagcacaaccagtgct
ccttcatttggtacaaccagtggcgggctctttggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggttttggcacaaataccagtgggagtagtattttt
ggaagtaaaccgggacctggcactctgggaactgggcttggtgcaggatttggaacagct
cttggtgctggacaggcatctttgtttgggaacaaccaacctaagatcggagggcctctt
ggtacaggagcctttggggcccctggatttaatactacgacagccactttgggctttgga
gccccccaggccccagtagctttgacagatcctaatgcttctgctgcccagcaagctgtt
ctgcaacagcacatcaatagtctaacatactcacctttcggagactctcctctgttccgg
aatcccatgtcagaccctaagaagaaagaagagagattgaaaccaacaaatccagcagcc
cagaaggctctcactacacccactcattataaactaacaccccgccctgccaccagagtt
cgaccaaaggctttacaaacaacaggcacagccaagtcacatctctttgatgggctggat
gatgatgagccatccttagccaatggagcattcatgcccaagaagagcattaagaagttg
gttttgaaaaaccttaacaatagcaatctcttctctcctgttaatcgtgactcagaagat
ctagcttcaccatctgattatccggaaaatggggagagattcagcttcctgagcaaacct
gtcgaagacaaccatcagcaggatggagatgatgattctcttgtgtcacgtttttatact
aaccctattgccaaacccattcctcaaaccccagagagtgctggaaataaacacaacagc
agtagcagtgtggatgatactattgttgcattaaacatgcgtgctgctttgcgaaatggg
ctggaaggaagcagtgaagagacctcttttcatgaggagtcacttcaggatgaccgagaa
gaaatagaaaataatacttaccatatgcatccagcaggcattgttctcaccaaggtcggt
tactatactattccatcgatggatgaccttgctaaaattaccaatgaaaaaggagagtgc
attgtctctgacttcactattggtcgtaaaggttatggttcaatctattttgaaggagat
gtgaatttgacaaatctaaatttggatgatattgtgcatattcgaaggaaagaagtgatt
gtctacttagatgataaccaaaaaccgcctgtgggtgaagggctaaataggaaggctgaa
gttacactggatggagtttggccaacagataaaacatctcgttgtttaataaagagccca
gatcgacttgctgatatcaactatgagggcagattggaagcagtttcaaggaaacaggga
gctcaattcaaagagtaccgtcctgaaacgggttcttgggtgtttaaggtctctcatttt
tccaagtatggccttcaggattctgatgaagaggaggaggaacgaccgtctaaaactagt
acaaagaagttgaagactgctcctttgcctcctgcaggccaggccaccccattccagatg
gctcttaatggcaagccagcacctccaccccagagccagagcccagaggtggagcagtta
gggagggttgtggagctggacagtgacatggtagatatcacccaggagccagttttggat
tccatgttagaagagagcgtgcctgaggatcaggagcccgtgtctgcctcaacacacatt
gcgtcttcactgggaattaatccacatgtcttacagatcatgaaagcatcattgcttgct
gatgaagaagatgtagatatggttctggatcaacgcttcagtcaccttccttctaaagca
gatacttctcaagaaatctgttctcccagactccccatttcagcatcccactcatcaaaa
tcccgttctttagttggtgggttactacaatcaaagttcactagtggatcttttctttca
ccaagtgcctctgtacaagaatgtcgtactcccagagcagcatctttgatgaatatccca
tccacgtccccttggtctgtccctccacccctgacctctgtgtttacagtgcccagccca
gcccctgaaattcaattgaaaaccgtgggtacacgcagacaaccaggcctagttcctctt
gaaaagtctgttacctatggcaaggggaaactcttgatggacatggccctatttatggga
cgctcatttcgagttggttggggacccaattggactcttgctaatagtggagaacagctg
agtggctcacatgaactggaaaatcatcagattgctgattctatggaatatggattcctg
cctaatccagtagctgttaaatccctaactgagtctccattcaaagttcatttggaaaaa
ctcagtttgagacaaaagaagccagatgaagacatacaattatatcagatacctctggag
ctcaaattaaaacatagtaccgtccatgtggatgaactgtgtcctctcattgtccctaat
ccaggagttgctgtcattcatgactatgcaaattgggttaagaaagcatcaggagatttt
ttggaagcacaaattgtgaagcactggagcctaacatggacattatgtgaagccttatgg
ggccacctgaaggagcctgacagccagctggatgagcccagtgaatacattcagattctg
gagcgaagaagaactttctctcgctggttatcccatactgccgcacctctaatagaggag
gaagtctccttaacccgaaaagacaagcctgtggaggctgtcttcagctacctcacgggc
aagaggatcagtgaggcctgttctctggcccagcagtcaggtgatcatcgtcttgccctt
cttttatcccagttggtgggtagccagtcaatccgggagctgcttaccatgcagctggtg
gactggcaacagctccaagctaactgtttcatccaggatgagagactgcggatctttgcg
ttgttggctggaaaaccggtatggcagctcacagagcacagacagatcaatgtgtgctca
tttttggattggaaacgtgccttggctgtccatctttggtatttgcttccaccaacagcc
tccatttccagggcactcagcatgtatgaagaagcatttcagagttcctctgaagctgac
agatatgcctgctccccacttccttcatacctggagggctctggctatgtgatagaggag
gagcaaaattcacagagaccacttcaagatgtctgctttcaccttctaaaactctatagt
gacagacattatgatctcaaccagctgctggagcctcgaagtgtaacagcagatcctttg
gactaccgcctaagctggcacttgtgggaggtgctgcgggctcttaattatactcatctc
tcagaacaatgtgagggtgtactacagaccagttatgctggccaactggaaagtgagggg
ctctgggagtgggccgtctttgtcctcctacacattgacaactcaagcatgcgtgagaag
gctgttcgagagctgcttacccggcactgccaactagtagagacccctgagtcttgggct
aaggagactttcctgactcaaaagctttgtgtgcctgctgagtggattaatgaggccaaa
gcagtgcgagcacacatggaatctgacaagcacttggaggccctctatttatttaaagct
ggacattggaaccgctgccacaaattcatcatcaagcacttagcttctgatgccatcatt
aatgagaactatgactacctgaaggggttcttggaagacctggcacctccagagcgtagt
agcctaatccaggactgggaaacatctgggcttgtttacttggactatattcggatcatt
gagatgcttcaccagatacagcaggtggattgctcagtttatgagctggaacagttacat
gccaaagtgatctccctgtgcaatcgcatacagcagatgcagtgttacaatgcaaaggat
ctcctggcccagtcagacatggccaaacgagcagccaacctgctacgggtggtatggagc
cttcagcgtgcccctgatacaacttctgactcaacaccagaccctcagcgagtccctttg
ggcctcttggctccccacattggccagctccccatgcctgaggactatgccttggaggaa
ctacgtggcctcacacagtcctacctgcgagaattgactgttgggagccagtga
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integrated database retrieval system
