Canis lupus familiaris (dog): 476881
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Entry
476881 CDS
T01007
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03022
Basal transcription factors
cfa03420
Nucleotide excision repair
cfa05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
476881 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
476881 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
476881 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
476881 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
cfa03400
]
476881 (GTF2H1)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
476881 (GTF2H1)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
476881 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
476881
NCBI-ProteinID:
XP_013978133
Ensembl:
ENSCAFG00000009171
VGNC:
41547
UniProt:
A0A8C0P8L8
A0A8I3NYI3
LinkDB
All DBs
Position
21:40250242..40286596
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNVNATESSSTSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKSLDEGYGISSVPSTSNSKSIKENSN
AAIIKRFNHHSAMVLAAGLRKQEAQNEQNGEPSSIDGNSGDADCFQPAVKRAKLQESIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ
VLSSSAASSTITTLSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHKWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaggttttgttgattgtgaagaaggtgcgtcaaaagaagcag
gatggagctttatacctcatggcagaaagaattgcttgggcacctgaaggcaaagataga
tttacaatcagccatatgtatgcagatattaaatgccagaaaatcagtccagaaggaaaa
gctaaaattcaacttcagctggtgttgcatgcaggggacacaactaacttccatttttcc
aatgaaagcacagctgtgaaagagcgagatgcagtgaaagaccttcttcagcagctgctg
cccaaattcaagaggaaagcaaataaagagctggaagagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagtcaagtgatcagcgctgag
gaattctgggccaatcgtttaaatgtgaatgcaacagagagttcttctacatccaatcat
aagcaggatgttggcatttctgcagcatttctggctgatgtccggccccaaacagatgga
tgtaatggtctgaggtacaatttaacctctgatatcattgagtccatatttaggacctat
ccagcagtaaaaatgaagtatgcagaaaatgttcctcacaacatgacagaaaaagagttt
tggacacgtttctttcagtcccattattttcatagggaccgcctgaatacggggtcaaaa
gacctctttgcagaatgtgccaaaattgatgaaaaagggttaaaaacaatggtttcatta
ggagtgaaaaacccactacttgatttgactgctttggaagataaatcattagatgagggc
tatggcatttcttctgtgccatctacttctaattctaaatccataaaggagaatagtaat
gctgccatcatcaagaggtttaaccatcacagtgccatggtccttgcagcaggtctcagg
aaacaagaagcacaaaatgaacaaaatggtgaacccagcagcatcgatggaaattctgga
gatgcagattgcttccagcctgcagtcaaaagggcaaagttacaagagtccattgaatat
gaagacttgggaaaaaataattccataaaaacgattgcactaaacctcaagaagtcagat
aggtattatcacggtccaactccaatccagtcactacaatatgcaacaagtcaggacatt
attaattcttttcaaagtattaggcaagaaatggaagcttatacacccaaattaactcag
gttctctcaagtagtgctgccagtagtactatcacaacgctgtcacctggaggagcactt
atgcagggagggacacagcaagccataaaccagatggtgccaaatgatattcagtctgaa
ttgaaacacctttatgtggctgttggggaacttctacggcacttctggtcctgctttcct
gttaatacaccattcctagaagaaaaggtagtgaaaatgaaaagtaatttggagcgattt
caagttacgaagctctgcccattccaagaaaaaattcggagacagtatttaagcacaaat
ttggtaagtcacatagaagagatgctccagacagcctacaacaagctccacaagtggcag
tcacggcgtctgatgaagaaaacgtga
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