Canis lupus familiaris (dog): 476948
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Entry
476948 CDS
T01007
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04517
IgSF CAM signaling
cfa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
476948 (LMO7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
476948 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfa04121
]
476948 (LMO7)
Ubiquitin system [BR:
cfa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
476948 (LMO7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_2
PDZ_6
CDR2_C
Motif
Other DBs
NCBI-GeneID:
476948
NCBI-ProteinID:
XP_013961829
Ensembl:
ENSCAFG00000005061
VGNC:
42725
LinkDB
All DBs
Position
22
Genome browser
AA seq
1820 aa
AA seq
DB search
MEEPGADCAVAFAEAQRWVEAVTEKNFETKDFRASLENGVLLCDLVNKLKPGVIKKINRL
STPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVRQEETDRRVKNVLITLYW
LGRKAQSNPYYNGPYLNLKAFENLLGQALTKALEDTSCLKRSGRDSGYGDIWCAERGDFP
TSPGNHKREDSFESLDSLGSRSFTSCSSDITLRGGREGCESDTDSEFTSRMQDYNKDDMS
YRRISAIEPKTALPFNRFLPNKSRQPSYVPAPLRKKKPDKNEDNRRSWASPVYPEADGTF
PSGHTGNPLISHQISRAEWDFSNPACYQKEVYGSESGSDSEDERRLPDIVLDDLANRRFR
VKKRPECFISKTTSPSSCSQRFPPADPLATGLYKLTSNERRTWGTNVENCPTVQETSSSS
CYLEEEREKTRTPNTIKDDLYVRKLSPIMPNPGNAFDQFLPKCWIPEDVNWKRIKRETYK
PWYKEFQGFRRNSDSEDEDLGSDRSSSIFSRIQKAKHRLDSNCQRRSLLLELATKGARSS
RNTHAARRTSGSADEPSQFLLLQALQTYSDDILASETNIKIDPTAGPRLITRRKNLSSAP
GCKRDDLEMPTLDPDLENDDFFVRKTGAFHANPYVLRAFEDLRRFSEPDDSVERDIILQC
REGELVLPDLEKDDMIVRRIPAQKKEVPLSGAPERYQPVPLPEPWTLPPEIQAKFLCVLE
RTHPSKEKRKSCGVLVPSSRKKRDDMLTRKIQSWQLGTTVPPVSFTPGPCSEADLRRWEA
IREASRLRHRKRLMVERLFQKIYGENGSKSMSDVSAEDIQNLRQLRYEEMQKIKSQLKEQ
DQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSERSSKTFKEMLQDRESRNQM
STVTSRRRLHSNDDVLNEEMLSPTLTMSEASYQSERVEEKETMYSTEIPKQDSTTFVKRE
DAVTTDIQLPSQSPMEEQLPDSLSSQHSPSTRMQSTRVSASLPRSYQKTDTARLTSVVTP
RPFGSQTRGISSLPRSYTMDDAWRYNGDVEDDKRTQNSFVSTSVQKPDTSQLASSKSSET
EIAAVGEGVMGLPSPTPSFSSLSQDQAATSKATLSSSSGPDLVSELGEGRSSPQTEVSRS
QDQFSDMRISINQTPGSGLDFGFTVKWAFSGIFVASVEAGSPAEFSQLQVDDEIIAINNT
KFSYKDTKEWEATMANAKETGNLVMDIRRYGKSDWGKDQPSLPFIRHKTLNLTSMATKII
GSPETKWIDTTSGIYNSDKSSSLSITTDFSESLQHSNTESKEINGIRDESNTFESKASEP
ISLKNLKRRSQFFEQGSSGFSYSSWVYLCGSSDSVVPDLPVPTLSTPSRWAWDQEEERRR
QERWQREQDRLLQEKYQREQEKLREEWQRAQQEAERENYKYLNEERMVLSSHSLSRPTRE
PAVATWETAWGEGSKSSDREGTRAGEEERRPQQKEDEEEDQRKRLQEQLALERERKLKEQ
QDQEEQERRRRQEEAQEQKPQAERERETTVKIYQYRRPIDSYDIPKREEQSSGLLPSDRN
KSRSTTELDGYPANKNGGNKYSDQIGSTSSSQRSSKKEQAPSEAELERQQILQEMRKRTS
LLNDNSWIRQRSSSVNKEPICLPGIMRRGESLDNLDSPRSSSWKPSPWFNQPSGVRASSS
VQDFSRPPPQLVSTSNRAYMRNPSSSIPPPSSAGSVQTTTAPSPTPHSPSPSLSQSGSQL
RNRSVSGKRVCSYCNSILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRN
HQLYCNDCYLRFKSGRPTAM
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcccggggccgactgcgcggtagccttcgccgaggcccagagatgggtggag
gcagtaacagagaagaattttgaaacaaaggattttcgagcttctctagagaatggtgtt
ctgttgtgtgatttggttaataaacttaagcctggtgtcattaagaagattaatagatta
tccacacctatagcaggtttggataatataaacgtttttttgaaagcttgtgaacagatt
ggattgaaagaagcccagcttttccatcctggggatctacaggatttatccaaccgagtc
actgtcaggcaagaagagactgataggagagtgaaaaatgttttgataacactgtactgg
ttgggaagaaaagcacaaagtaacccgtactataatggaccctatcttaatttgaaagca
tttgagaatcttttaggacaagctctgactaaggctcttgaagacactagctgtctgaaa
aggagtggcagggacagtggttacggtgatatctggtgtgctgaacgtggagattttcct
acttctccaggcaaccataagcgagaagattcatttgaaagcttggactctttggggtct
agatcattcacaagctgctcctctgatattacgttgagagggggacgtgagggttgcgaa
agtgacacagattctgaatttacatccagaatgcaggattataataaagatgatatgtcc
tatcgaaggatttcagcaattgaaccaaaaactgctttaccgttcaatcgttttttgccc
aataaaagtagacagccatcctatgtgccagcgccattgagaaagaaaaagccggacaaa
aacgaggataacagaagaagttgggccagcccagtctatccagaagcagatggaacattt
ccaagtggacacacagggaatcctttaatttcccatcaaattagcagagcagagtgggat
ttttcaaatccagcttgctatcagaaggaggtgtatggttctgaaagtggttctgactcc
gaggatgaacgaaggttgcctgacatagttttggatgacttagccaaccgtagattccga
gtgaaaaagaggcctgagtgtttcatctcgaaaaccacctctcctagctcttgctcacaa
aggtttcctcctgctgacccattagccactgggctgtacaaattgacgagtaacgagagg
agaacttggggcacaaatgtcgagaattgtccaaccgtacaagaaacttcaagctcctct
tgttacttggaagaggaaagagaaaagacaaggacacccaacaccataaaggatgatctt
tatgtgcgaaagctaagtcccatcatgccaaacccagggaatgcttttgatcagtttctt
cccaaatgttggatcccagaagatgtgaactggaaaagaataaagagagaaacttacaaa
ccatggtataaagaatttcagggattcaggaggaattcagattctgaggatgaggatttg
ggctctgacagaagctcctccatatttagtagaatccaaaaagcaaagcataggctagac
agcaactgccaaagacgttcactcttgctggaattggctaccaaaggggccaggagctcc
cggaacacccatgcagccaggagaaccagtggttctgcggatgagcccagtcagttttta
ttacttcaggcactccaaacatattctgatgacatcttagcttctgaaacaaatatcaaa
attgatcccactgccggcccaaggctcataacacgcagaaagaatctctcttctgcacca
gggtgtaaaagagatgaccttgagatgccaactctagatcctgacttggagaatgatgat
ttctttgtcagaaagactggggcttttcatgcaaatccatatgttctccgggctttcgaa
gacttgagaaggttttccgagccagatgattctgtagagcgagatataattctgcagtgt
agagaaggtgaacttgtactcccagatctagaaaaagatgacatgattgttcgccgaatt
ccagcgcagaagaaagaggtgcctctgtcaggggccccagagagataccaaccagtccct
ctccccgaaccctggactcttcctccagaaattcaagcaaaatttctctgcgtacttgaa
aggacacacccatccaaagaaaaaagaaagagctgtggagtgttagtgccttcctccagg
aagaagagagatgacatgttgactcgcaagatccagtcttggcagctggggacgactgtg
cctcctgtcagtttcactcctggtccctgcagtgaggcggacctgcggaggtgggaggcc
atccgagaggccagccgacttaggcacaggaaacggctgatggttgagagactctttcaa
aagatttatggtgagaatgggagtaagtccatgagtgatgtcagcgcagaggatattcag
aacttgcgtcagctgcgttacgaggagatgcagaaaataaaatcacaattaaaagaacaa
gatcagaaatggcaagatgaccttgcaaaatggaaagatcgtcgaaaaagctacacttca
gatctgcagaagaaaaaagaagagagggaagaaattgaaaagcaggcacttgagaagtcc
gagagaagctctaagacctttaaggaaatgctgcaggacagggaatcccgaaaccaaatg
tccacagtgacatcgaggaggaggttgcattctaatgatgatgtgttgaatgaagagatg
ctttctcctacactgactatgtcagaagcaagttaccagagtgagagagtagaagagaag
gaaaccatgtattctacagaaattcctaaacaagattctacaacttttgtgaaaagagag
gacgctgtaaccactgacattcagctaccttctcaaagccccatggaagaacaactccca
gactctttgtcttctcagcattcaccaagtacacgaatgcagtcgactcgagtttcagcc
tctctccccagaagttaccagaaaaccgatacagccaggttaacatctgtggtcacaccg
agaccttttggctctcagacgaggggaatctcatcactcccaagatcctacacgatggat
gatgcttggaggtataatggagatgtagaagatgataagagaactcagaacagctttgtc
agcacctctgtgcaaaaaccggacacaagccagcttgcttccagcaagtccagcgagaca
gagatagcagcggtgggagaaggtgtgatggggctgccctctcctacaccctccttctca
tcactttcccaggaccaagctgccacttctaaagccacactgtcttcatcatctggccct
gatttagtgtctgagcttggagaagggagaagctcaccacagacggaggtctcaagatcg
caggatcagttcagtgatatgagaatcagcataaaccagacgcctgggagcggtcttgac
tttgggtttacggtaaaatgggcattttctgggatcttcgttgcatcagttgaagcaggt
agtccagcagaattttctcagctgcaggtagatgatgaaattattgctattaacaacact
aagttttcatataaggacacaaaagagtgggaggcaaccatggctaatgctaaagaaact
ggaaacctagtaatggatatcaggcgctatggaaagtctgactggggcaaagaccaacct
tccctgccatttatacgtcataaaaccctcaatctcaccagtatggctaccaaaattata
ggttcacctgaaacaaagtggattgatacaacttctggaatttacaattctgataaatct
tcaagtctgtcaataacgactgatttctcagaaagcctccagcattctaatactgaatct
aaggaaattaatgggatccgtgatgaaagtaatacttttgaatcgaaagcctctgaacct
atttctttgaaaaacttaaaaaggcgatcacaattttttgaacaagggtcatcaggcttt
tcttacagttcatgggtctacctctgtggaagctcggattctgtggttcctgatcttccc
gttccgacgctcagtaccccaagccgctgggcgtgggatcaagaggaggagcgcaggcgg
caggagagatggcagagggagcaggaccgcctgctgcaggagaaatatcaacgtgagcag
gagaaactcagggaagagtggcagagggctcagcaggaagctgaaagagagaactacaag
tacttgaacgaggaacggatggtcctgagctcacacagcctttcccggcccactcgggag
cccgcagttgccacctgggaaaccgcctggggcgagggttccaagtcatcagaccgggaa
ggcacccgagcaggagaagaggagaggagaccacagcagaaggaggatgaggaggaggac
caaagaaagaggctgcaggagcagctcgccctggagagagagaggaaactgaaggagcaa
caggatcaagaagagcaggagcggcgtcggcgtcaagaggaggcccaggagcagaagccc
caggcagaaagagagagggaaaccacagtcaaaatataccagtacagaaggcctattgat
tcctatgatataccaaagagagaagaacaatcttcagggttgcttcctagtgacaggaat
aaatccagatccactaccgaactggatggttaccctgcaaataaaaatggaggcaataaa
tattcagaccaaattgggagcactagctcatcacagaggagctccaagaaggaacaagcc
ccatcagaagcagagttagagagacaacaaattcttcaagaaatgaggaagaggacatct
cttctcaatgacaatagctggatccgacagcgcagttccagtgtaaataaagagccgatt
tgtctgcctgggattatgagaagaggtgaatctctagataacctggattccccaagatcc
agttcttggaaaccatccccttggttcaatcagccttcaggagtccgtgcttcttcctct
gttcaagactttagtcgcccccctcctcagctggtgtccacgtcgaaccgtgcctacatg
cggaatccatcttccagcattccccctccttcttcagctggttctgtgcagaccaccacc
gcaccttctcccacaccacacagtccttctccttcactatcacagtcgggctcccagcta
cgcaacaggtcagtgagtgggaagcgcgtgtgctcctactgtaatagcattctgggcaaa
ggagctgccatgatcatcgagtccctgggtctttgttatcatttgcattgttttaagtgt
gtggcctgcgagtgtgacctcggaggctcctcctcaggagccgaagtcagaatcagaaac
catcaactgtactgcaacgactgctatctcagattcaaatctggacggccaactgccatg
tga
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integrated database retrieval system
