Canis lupus familiaris (dog): 477014
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Entry
477014 CDS
T01007
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
477014 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
477014 (TRIM71)
04121 Ubiquitin system [BR:
cfa04121
]
477014 (TRIM71)
Enzymes [BR:
cfa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
477014 (TRIM71)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
477014 (TRIM71)
Ubiquitin system [BR:
cfa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
477014 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
zf-B_box
DUF5128
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
COG5_N
Motif
Other DBs
NCBI-GeneID:
477014
NCBI-ProteinID:
XP_534214
Ensembl:
ENSCAFG00000025466
VGNC:
47837
UniProt:
A0A8C0RU79
A0A8I3PMN9
LinkDB
All DBs
Position
23:complement(3932083..4003431)
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AA seq
868 aa
AA seq
DB search
MASFPEADFQVCLLCKEMCGSPAPLSSSSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAAAGAGGHSNHRHHAHHAHPRAPASAPPPLPPAPPPPAPSRS
APGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIE
RGPPGPAAAAAPQLGLGPPFPGAPFSILSVFPERLGFCQQHDDEVLHLYCDTCSVPICRE
CTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVV
QSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQSLNKLESTISAVQQ
VLEEGRALDVLLARDRMLAQVQELKTVRSFLQPQEDDRVMFTPPDQALYLAIKSFGFVSS
GAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEV
SDQQNGTYVVSYRPQLEGEHLVSVTMCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEG
DSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVA
CDTSRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTR
NHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQS
ARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGTQGSGFGQ
MDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgaggccgacttccaggtctgcctgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccagctcgtccgcgtcgtcgtcgtcctcgcagacgtccacg
tcgtcgggcggcggcggcgggggcccgggggccgcggcgcgccgcctgcacgtcctgccc
tgcctgcacgccttctgccgcccgtgcctcgaggcgcaccggctgccggcggccggcggc
ggcgcgcccggagagcccctcaagctgcgctgcccggtgtgcgaccagaaggtcgtgctg
gccgaggcggcgggcatggacgcgctgccctcgtccgccttcctgctcagcaacctgctg
gacgccgtggtggccacggccgacgagccgccgcccaagaacgggcgcgccggagccgcg
gcgggcgcgggcggccacagcaaccaccggcaccacgcgcaccacgcgcacccgcgcgcg
cccgcctcggccccgccgccgctcccgcccgcgccgccgccgcccgcgccctcccgctcg
gcgcccggcggccccgcggcctccccgtccgcgctgctgctgcgccggcctcacggctgc
agctcctgcgacgagggcaacgccgcctcgtcgcgctgcctggactgccaggagcacctg
tgcgacaactgcgtccgcgcgcaccagcgcgtgcgcctcaccaaggaccactacatcgag
cgcggcccgccggggcccgcggccgccgccgcgccgcagctcgggctggggccgcccttc
ccgggcgcgcccttctccatcctgtcggtgttccccgagcgcctcggcttctgccagcaa
cacgacgacgaggtgctgcacctgtactgtgacacttgttcagtgcccatctgtcgtgag
tgcacaatgggccggcatgggggccacagcttcatctacctccaggaggcgctgcaggac
tcgcgggcacttaccatccagctgctggctgacgcacagcagggccgccaggcaatccag
ctgagcatcgagcaggcccagactgtggcggagcaggtggagatgaaggcaaaggtggta
cagtcggaggtcaaagctgtgactgcaaggcacaagaaagccctggaggagcgggagtgc
gagctgctatggaaggtagagaagatccgccaggtgaaagccaagtccctctatctgcaa
gtggaaaagctacggcaaagcctaaacaagcttgagagcaccatcagcgctgtccagcag
gtcctggaggaagggcgggcgctggatgtcctgctggcccgggaccgcatgctggcccag
gtgcaggagctgaagaccgtgcgtagcttcctacagccccaagaggatgaccgcgtcatg
ttcacgccccccgaccaggcactgtaccttgccatcaagtcctttggcttcgtcagcagc
ggggcctttgcaccgctcaccaaggccacgggtgatggcctcaagcgagccctccagggg
aaggtggcctccttcactgttattggctatgaccacgatggggagcctcgcctctcagga
ggtgacctgatgtcagcggtggtcctgggccctgatggcaacctgtttggtgccgaggtg
agcgatcagcagaatgggacttacgtggtcagctaccggccgcagctggagggtgagcac
ctggtgtcagtcaccatgtgcaaccagcacatcgagaacagccccttcaaggtggtggtc
aagtcgggtcgcagttatgtgggcattgggctcccgggcctgagtttcggcagcgagggc
gacagtgacggcaagctctgccggccctggggcgtgagtgtggacaaggaaggctacatt
gtagtggccgaccgcagcaacaaccgcatccaagtgttcaagccatgtggcaccttccac
cacaaattcggcaccctgggttcccggcctgggcaattcgaccggccagccggcgtggcc
tgcgacacctcccgcaggattgtggtggcagacaaggacaatcatcgcatccaagtcttc
acgttcgagggccagttcttgctcaagtttggtgagaaaggaaccaaaaatgggcagttc
aactacccttgggatgtggcggtgaactctgagggcaagatcctggtctctgacacccgt
aaccaccggatccagctttttgggcctgacggtgtcttcctgaataagtatggcttcgag
ggagcactctggaagcactttgactccccccggggcgtggccttcaaccatgagggccac
ttggtggtcaccgacttcaacaaccaccgtctcctggtcatccaccctgattgccagtct
gcgcgcttcctgggctctgagggcactggcaatgggcagttcctgcgcccacagggtgtg
gccgtggaccaggaggggcgcatcattgtggccgattccaggaaccaccgggtgcagatg
ttcgagtcaaatggcagcttcctgtgcaagtttggcacccagggcagtggctttgggcag
atggaccggccctctggcatcgctgtcacccccgatggcatgatcgtggtggtggacttt
ggcaacaatcggatcctcattttctaa
DBGET
integrated database retrieval system
